LOCUS BC030640 2865 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B2, mRNA (cDNA clone MGC:26702 IMAGE:4821062), complete
cds.
ACCESSION BC030640
VERSION BC030640.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2865)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2865)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC030640.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: a Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..2865
/db_xref="H-InvDB:HIT000041081"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26702 IMAGE:4821062"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2865
/gene="ATP6V1B2"
/gene_synonym="ATP6B1B2"
/gene_synonym="HO57"
/gene_synonym="VATB"
/gene_synonym="Vma2"
/db_xref="GeneID:526"
/db_xref="HGNC:HGNC:854"
/db_xref="MIM:606939"
CDS 27..1562
/gene="ATP6V1B2"
/gene_synonym="ATP6B1B2"
/gene_synonym="HO57"
/gene_synonym="VATB"
/gene_synonym="Vma2"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B2"
/protein_id="AAH30640.1"
/db_xref="GeneID:526"
/db_xref="HGNC:HGNC:854"
/db_xref="MIM:606939"
/translation="MALRAMRGIVNGAAPELPVPTGGPAVGAQEQALAVSRNYLSQPR
LTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGT
SGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINP
QCRIYPEEMIRTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKD
VVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI
YERAGRVGGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPI
NVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLL
YLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDS
AKH"
BASE COUNT 727 a 610 c 687 g 841 t
ORIGIN
1 gggtcagtcg ggacagagga gacaagatgg cgctgcgggc gatgcggggg attgtcaacg
61 gggccgcacc cgagctaccc gtgcccaccg gtgggccggc ggtgggagct caggagcagg
121 cgctggcagt cagtcggaac tacctctccc agcctcgcct cacatacaag acagtatctg
181 gagtcaatgg tccactagtg atcttagatc atgttaagtt tcccaggtat gctgaaattg
241 tccatttgac cttaccggat ggcacaaaga gaagtgggca agttctggaa gttagtggtt
301 ccaaggcagt agttcaggta tttgaaggga cttcaggtat agatgctaag aaaacgtcct
361 gtgagtttac tggggatatt ctccgaacac cggtgtctga ggatatgctt ggtcgggtat
421 tcaatggatc gggaaaaccc attgacagag gtcctgttgt actggccgaa gacttccttg
481 atatcatggg tcagccaatc aaccctcaat gtcgaatcta cccagaggaa atgattcgga
541 ctggcatttc ggccatcgat gggatgaaca gtattgctag ggggcagaaa attcctatct
601 tctctgctgc tgggctacca cacaatgaga ttgcagctca gatctgtcgc caggctggtt
661 tggtaaagaa atccaaagat gtagtagact acagtgagga aaattttgca attgtatttg
721 ctgctatggg tgtaaacatg gaaactgccc ggttcttcaa atctgacttt gaagaaaatg
781 gctcaatgga caatgtctgc ctctttttga acttggctaa tgacccaacc attgagcgaa
841 ttatcactcc tcgcctggct ctaaccacag ctgaatttct ggcgtaccaa tgtgagaaac
901 atgtattggt tattctaaca gacatgagtt cttatgctga agcacttcga gaggtttcag
961 cagccaggga agaggtacct ggtcgacgag gttttccagg ttacatgtat acagatttag
1021 ccacgatata tgaacgcgct gggcgagtgg gagggagaaa cggctcgatt actcaaatcc
1081 ctattctaac catgcctaat gatgatatca ctcaccccat cccagacttg actggctaca
1141 ttacagaggg gcagatctat gtggacagac agctgcacaa cagacagatt tatccaccta
1201 tcaatgtgct gccctcacta tcacggttaa tgaagtctgc tattggagaa gggatgacca
1261 ggaaggatca tgccgatgta tctaaccagc tatatgcgtg ctatgctatt ggaaaggatg
1321 tgcaagccat gaaagctgtc gttggagaag aagcccttac ctcagatgat cttctctact
1381 tggaatttct gcagaagttt gagaggaact tcattgctca gggtccttac gaaaatcgca
1441 ctgtctttga gactttggac attggctggc agctactccg aatcttcccc aaagaaatgc
1501 tgaagagaat ccctcagagc accctcagcg aattttaccc tcgagactct gcaaagcatt
1561 agctgctgct tctgcattgc tccgcgctct tgtgaaatac tggttctgtt ttctttattc
1621 cttttgcact ctcggttccc acctttgtgt tggagtttac catgttaccc tgtaattaaa
1681 aacaaagaat aggtaacata ttgtgccagt gttgcaacgt tttaaactgc taacagacct
1741 taaaatatcc ccctacctgg gtcctcagtg ctatgtttaa agtgctgcag ggatggagtg
1801 gcgttttctt attgctgtat gtattgtaca tagtggagta gttagttacc tgataacagt
1861 cttgttattt gggtctctta gaccttacct ctcaactccc tcaagagtac cagtctctga
1921 agttataatg ctttggtctc tacattaggg gcaagatcca gtctgagaga agtctccttt
1981 gagaagggcc aagaggctct ttcctgagtg tttgctttcg gtttgttggt atgcctgtat
2041 tgctgggctg tgctgctgct cgaagcagat ggttttgact gtctttttgc tctttcctat
2101 ataatgaata gatgagtgaa aggagttttc tttttctctt tagtacttac gtattgggat
2161 tcctgtgtct tacagctctc cctctccaaa taatacacag aatcctgcaa ctttttgcac
2221 agctggtatc tgtctggtag cagtgagacc ccttgtcttg gtgatcctta ctgggtttcc
2281 aagcagagga gtcacatgat tacaattgcc agtagagttg ttgtttgggg tacaagatga
2341 gaagaaagaa aaacctacag cctttctaca ttctgacatg ctaacagtgg tttaagtttc
2401 taaagtgttt accagatgct gaaggcaagg ggagggagca gaagcactta tgtttacgga
2461 tattttaaac tctgttagag agcagccttt gaaaatcccc aatttggttc tgctttttga
2521 cctctctcta ccttttcagg gtaatctttg tggcacaaac gatagcattt ccaagcttta
2581 gagttttctg aattcctgcg ccttcctgac gtgagccctg agcgatcttc tatgcagttc
2641 tgccatgcgt cctgttggtc tctctgtgtt ctttgttact tgggtgcaat agcaacttcc
2701 ctaccccgtg cattccatct ttcatgttgt gtaaagttct tcactttttt ctctgagggc
2761 tgggggttgg gggagtcagc atgattatat tttaatgtag aaaatgtgac atctggatat
2821 aaaatgaaaa taaatgttaa attaaatgga aaaaaaaaaa aaaaa
//