LOCUS BC030615 3011 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens lysophosphatidic acid receptor 1, mRNA (cDNA clone
MGC:33156 IMAGE:4815446), complete cds.
ACCESSION BC030615
VERSION BC030615.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3011)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3011)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030615.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45580697.
FEATURES Location/Qualifiers
source 1..3011
/db_xref="H-InvDB:HIT000041072"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33156 IMAGE:4815446"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3011
/gene="LPAR1"
/gene_synonym="edg-2"
/gene_synonym="Gpcr26"
/gene_synonym="GPR26"
/gene_synonym="LPA1"
/gene_synonym="Mrec1.3"
/gene_synonym="rec.1.3"
/gene_synonym="vzg-1"
/gene_synonym="VZG1"
/db_xref="GeneID:1902"
/db_xref="HGNC:HGNC:3166"
/db_xref="MIM:602282"
CDS 256..1350
/gene="LPAR1"
/gene_synonym="edg-2"
/gene_synonym="Gpcr26"
/gene_synonym="GPR26"
/gene_synonym="LPA1"
/gene_synonym="Mrec1.3"
/gene_synonym="rec.1.3"
/gene_synonym="vzg-1"
/gene_synonym="VZG1"
/codon_start=1
/product="LPAR1 protein"
/protein_id="AAH30615.1"
/db_xref="GeneID:1902"
/db_xref="HGNC:HGNC:3166"
/db_xref="MIM:602282"
/translation="MAAISTSIPVISQPQFTAMNEPQCFYNESIAFFYNRSGKHLATE
WNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAY
FYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMS
NRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTF
VVMVVLYAHIFGYVRQRTMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWTPGLV
LLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILCCQRSENP
TGPTEGSDRSASSLNHTILAGVHSNDHSVV"
BASE COUNT 880 a 642 c 582 g 907 t
ORIGIN
1 agtaagcagg gctgcatggt gtggggatgc tgctgctact cattcctgct cattccagtg
61 ttctggaaaa tgaggtggac gtctgattta tgaagctccc catccaccta tctgagtacc
121 tgacttctca ggactgacac ctacagcatc aggtacacag cttctcctag catgacttcg
181 atctgatcag caaacaagaa aatttgtctc ccgtagttct ggggcgtgtt caccacctac
241 aaccacagag ctgtcatggc tgccatctct acttccatcc ctgtaatttc acagccccag
301 ttcacagcca tgaatgaacc acagtgcttc tacaacgagt ccattgcctt cttttataac
361 cgaagtggaa agcatcttgc cacagaatgg aacacagtca gcaagctggt gatgggactt
421 ggaatcactg tttgtatctt catcatgttg gccaacctgt tggtcatggt ggcaatctat
481 gtcaaccgcc gcttccattt tcctatttat tacctaatgg ctaatctggc tgctgcagac
541 ttctttgctg ggttggccta cttctatctc atgttcaaca caggacccaa tactcggaga
601 ctgactgtta gcacatggct ccttcgtcag ggcctcattg acaccagcct gacggcatct
661 gtggccaact tactggctat tgcaatcgag aggcacatta cggttttccg catgcagctc
721 cacacacgga tgagcaaccg gcgggtagtg gtggtcattg tggtcatctg gactatggcc
781 atcgttatgg gtgctatacc cagtgtgggc tggaactgta tctgtgatat tgaaaattgt
841 tccaacatgg cacccctcta cagtgactct tacttagtct tctgggccat tttcaacttg
901 gtgacctttg tggtaatggt ggttctctat gctcacatct ttggctatgt tcgccagagg
961 actatgagaa tgtctcggca tagttctgga ccccggcgga atcgggatac catgatgagt
1021 cttctgaaga ctgtggtcat tgtgcttggg gcctttatca tctgctggac tcctggattg
1081 gttttgttac ttctagacgt gtgctgtcca cagtgcgacg tgctggccta tgagaaattc
1141 ttccttctcc ttgctgaatt caactctgcc atgaacccca tcatttactc ctaccgcgac
1201 aaagaaatga gcgccacctt taggcagatc ctctgctgcc agcgcagtga gaaccccacc
1261 ggccccacag aaggctcaga ccgctcggct tcctccctca accacaccat cttggctgga
1321 gttcacagca atgaccactc tgtggtttag aacggaaact gagatgagga accagccgtc
1381 ctctcttgga ggataaacag cctcccccta cccaattgcc agggcaaggt ggggtgtgag
1441 agaggagaaa agtcaactca tgtacttaaa cactaaccaa tgacagtatt tgttcctgga
1501 ccccacaaga cttgatatat attgaaaatt agcttatgtg acaaccctca tcttgatccc
1561 catcccttct gaaagtagga agttggagct cttgcaatgg aattcaagaa cagactctgg
1621 agtgtccatt tagactacac taactagact tttaaaagat tttgtgtggt ttggtgcaag
1681 tcagaataaa ttctggctag ttgaatccac aacttcattt atatacaggc ttcccttttt
1741 tatttttaaa ggatacgttt cacttaataa acacgtttat gcctatcagc atgtttgtga
1801 tggatgagac tatggactgc ttttaaacta ccataattcc attttttccc ttacatagga
1861 aaactgtaag ttggaattat cttttgttta gaaagcatgc atgtaatgta tgtatgcagt
1921 atgccttact taaaaagatt aaaaggatac taatgttaaa tcttctagga aatagaacct
1981 agacttcaaa gccagtattt gtttaggtca tgaagcaaac aatgctctaa tcacaatatt
2041 aactgtttaa ttaaaatgtt gtaacaagta taaaacaggg aatgtaagtt tattaccaaa
2101 gtgatatgta ttccaaaaaa gtcatagaag atgaagcact ataatattgt tcccatatat
2161 ttaaaatacc caagtacatt ctaattacca gtatatcaga ggaaaatttt cgtagtcttt
2221 gtaaaataat atactcatca tagaaaactt gaaaaatgca gaaatgtata aaaaagcaaa
2281 aatgattact gataatatca caacccagaa gtaaccacct ttaaaaagca acccccatgt
2341 atgcctatat gtgtattgta tacttttttt acataattgg agtcatactg taaacagttt
2401 tataagtaga tctttttcat tgcaaaattg ccacattttc ttatggcatt aaaaatttta
2461 caaaaacata attttaatgg ctatattata ttccatttaa tggatgcaac tcagtttatt
2521 taaccattcc catgttgtta actatttagg ttgtttctaa ttttcattat tataaagttg
2581 cagaaatttg gtgtacataa aactgtctcc atataattga ttattaggat atattcccat
2641 gaaggattct ttttttaaaa aaatgtgaaa tgtcatcttg tacttacacc tttcatgaaa
2701 agggatttcc tgcttttgta ctgcatgggt ggcagttgtg aggaaaagcc agtcaaatga
2761 cctttttaca aaagaaatgc agtggtcact tcagttgaga gtgacttttt aatacaacaa
2821 gatcaactag aagaattcaa ctgtctcaag aatcaaggta ccccaatata tctcgcaatt
2881 ccaaactttg tttgagggac tcgttatcca gctcttggta gccacacctg caatgtaaaa
2941 tggaagaaaa tgcaaagaaa ccaaatgtgc cgagtgaata aaggattgtc ataccaaaaa
3001 aaaaaaaaaa a
//