LOCUS BC030612 2948 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens G elongation factor, mitochondrial 2, mRNA (cDNA clone
MGC:32927 IMAGE:4811939), complete cds.
ACCESSION BC030612
VERSION BC030612.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2948)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: d Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25306279.
FEATURES Location/Qualifiers
source 1..2948
/db_xref="H-InvDB:HIT000041069"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32927 IMAGE:4811939"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2948
/gene="GFM2"
/gene_synonym="EFG2"
/gene_synonym="hEFG2"
/gene_synonym="MST027"
/db_xref="GeneID:84340"
/db_xref="HGNC:HGNC:29682"
/db_xref="MIM:606544"
CDS 208..2541
/gene="GFM2"
/gene_synonym="EFG2"
/gene_synonym="hEFG2"
/gene_synonym="MST027"
/codon_start=1
/product="G elongation factor, mitochondrial 2"
/protein_id="AAH30612.1"
/db_xref="GeneID:84340"
/db_xref="HGNC:HGNC:29682"
/db_xref="MIM:606544"
/translation="MLTNLRIFAMSHQTIPSVYINNICCYKIRASLKRLKPHVPLGRN
CSSLPGLIGNDIKSIHSIINPPIAKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGD
VDDGDTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRVLD
GAVAVFDASAGVEAQTLTVWRQADKHNIPRICFLNKMDKTGASFKYAVESIREKLKAK
PLLLQLPIGEAKTFKGVVDVVMKEKLLWNCNSNDGKDFERKPLLEMNDPELLKETTEA
RNALIEQVADLDDEFADLVLEEFSENFDLLPAEKLQTAIHRVTLAQTAVPVLCGSALK
NKGIQPLLDAVTMYLPSPEERNYEFLQWYKDDLCALAFKVLHDKQRGPLVFMRIYSGT
IKPQLAIHNINGNCTERISRLLLPFADQHVEIHSLTAGNIALTVGLKHTATGDTIVSS
KSSALAAARRAEREGEKKHRQNNEAERLLLAGVEIPEPVFFCTIEPPSLSKQPDLEHA
LKCLQREDPSLKVRLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYRE
TILNSVRATDTLDRTLGDKRHLVTVEVGARPIETSSVMPVIEYAESINEGLLKVSQEA
IENGIHSACLQGPLLGSPIQDVAITLHSLTIHPGTSTTMISACVSRCVQKALKKADKQ
VLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDNKVVIGFVPLAGIMGYSTV
LRTLTSGSATFALELSTYQAMNPQDQNTLLNRRSGLT"
BASE COUNT 908 a 558 c 667 g 815 t
ORIGIN
1 agcggtgtgg ctgcccgagg cggtagagcg gagaaagcct attttctttt cgtttagata
61 cattaccttt tgcctaggct ggcgtcgaga cttgaggccg ttgcagactt tggcgcggct
121 cgcgcctcct gcttcaagag cccagcggtg agagctggcc tgcggcacgc ggcctaatgc
181 cagacagtaa cagtttggag gatcaagatg ttgaccaact tgaggatatt tgcaatgagt
241 catcagacaa tacccagtgt gtatattaat aatatatgct gctataaaat aagagcaagt
301 ttaaaaagat taaagccaca tgtgccgctt ggaagaaatt gcagttctct accaggctta
361 ataggaaatg atatcaaatc cattcattcc atcatcaatc ctcccatagc taaaatccgt
421 aatattggaa ttatggctca tattgatgca ggcaaaacta ccaccacaga aagaatattg
481 tactattccg gatatacaag atcactggga gatgttgatg atggagacac agtgacagat
541 ttcatggccc aagagcgaga aagaggcatt actattcaat cagctgctgt tacatttgat
601 tggaaaggtt atagagtcaa tctaattgat acaccaggtc atgtggactt taccttggag
661 gttgaacggt gcctaagagt gttggatggt gcagtggctg tatttgatgc ctctgctggt
721 gtagaggccc agactctcac agtatggagg caagctgata aacacaatat acctcgaatc
781 tgttttttaa acaagatgga caaaactgga gcaagcttta agtatgcagt tgaaagcatc
841 agagagaagt taaaggcaaa gcctttgctt ttacagttac caattggtga agccaaaact
901 ttcaaaggag tggtggatgt agtaatgaaa gaaaaacttc tttggaattg caattcaaat
961 gatggaaaag actttgagag aaagcccctc ttggaaatga atgatcctga attgctgaag
1021 gaaacaactg aagcaaggaa tgccttaatt gaacaagttg cagatttgga tgatgaattt
1081 gctgacttgg ttttagaaga atttagtgag aattttgatt tgttaccagc tgaaaagcta
1141 cagactgcaa tacatagagt gacactagct cagacagcag tgcctgtgct ttgtggaagt
1201 gccctgaaaa acaaagggat acagcccttg ttagatgctg ttactatgta cttaccttca
1261 cctgaagagc gtaactatga atttctgcag tggtataagg atgacttatg tgcattggca
1321 tttaaagttc tccatgacaa gcagcgagga ccactggttt ttatgcgcat ttactcaggc
1381 actataaaac cccagttggc cattcataat attaatggaa actgcacgga gagaataagt
1441 cgtctgcttt tgccgtttgc tgaccaacat gtagaaatcc attcattgac tgctggtaac
1501 attgctttga ctgttgggct taaacatact gccactggag acaccattgt ctcatccaag
1561 tccagtgcat tagctgcagc tcgtagagcc gaacgggagg gagaaaagaa gcacagacaa
1621 aacaatgaag cagagagact tttattggct ggagtggaga ttccagaacc tgttttcttc
1681 tgtaccatag aacccccatc actgtctaag cagccagatt tggaacatgc gttgaaatgt
1741 cttcagcgtg aagatcccag tttgaaagtg aggctagatc ctgactctgg acaaactgtt
1801 ctgtgtggta tgggggagtt acatatagag attattcatg atcgaatcaa gagggaatat
1861 ggactggaga cctatctcgg gcctctccag gtggcatatc gagagaccat cctaaactca
1921 gttcgtgcca cagatacctt agatagaact ttaggagaca aaaggcatct tgtgactgta
1981 gaagtgggag caaggccaat tgaaacatca tctgttatgc ctgtgattga gtatgctgaa
2041 agtatcaatg aaggcctttt gaaggtctca caagaggcca ttgaaaatgg aattcacagc
2101 gcatgtctcc aaggaccatt gcttggatcc ccaattcagg atgtagcaat tactttacat
2161 tccctgacaa ttcatcctgg cacctccaca actatgattt ctgcctgtgt ctcaagatgc
2221 gtgcaaaagg ctctgaagaa agctgataag caagttttgg agcctctgat gaatcttgag
2281 gttacagtag ctagagatta tctcagccct gtcctggcag atctggcaca aagaagagga
2341 aacattcagg aaattcagac tcgccaggac aacaaagttg ttattggatt tgttccctta
2401 gcaggaatta tgggttattc aactgtgctt cgaacgctaa catcaggctc agctactttt
2461 gccttagaac tatctactta tcaagccatg aatcctcaag atcaaaatac actgctcaac
2521 cggagaagtg gtttgaccta aatgttttag tttttggaga gaaattcagg agcacctagc
2581 tacttcattt tcagtaagaa caatttttat tgctttattt attggacgaa taaagtactg
2641 tttcagtaca ttcagagaac tagataaaag atataactta agctttgata gtggcactgg
2701 agccacccgt tttaatttat ataatgagaa atgtgctttg atgtttaaag ccactgtacc
2761 tgaatcatgc tgttcatcta tgaagttatt actataagta gccttcagaa gagtggtatc
2821 acaaagttgt gtttcttttg tgtccttaag cttgtctcac aagaaagatg ccaggcctct
2881 aaatgtaata agatagaggg tcaaaggttc aatcaataaa aatattttat tcaaaaaaaa
2941 aaaaaaaa
//