LOCUS BC030587 3313 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I,
beta, mRNA (cDNA clone MGC:26375 IMAGE:4823087), complete cds.
ACCESSION BC030587
VERSION BC030587.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3313)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030587.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505816.
FEATURES Location/Qualifiers
source 1..3313
/db_xref="H-InvDB:HIT000041056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26375 IMAGE:4823087"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3313
/gene="PIP5K1B"
/gene_synonym="MSS4"
/gene_synonym="STM7"
/db_xref="GeneID:8395"
/db_xref="HGNC:HGNC:8995"
/db_xref="MIM:602745"
CDS 306..1955
/gene="PIP5K1B"
/gene_synonym="MSS4"
/gene_synonym="STM7"
/codon_start=1
/product="phosphatidylinositol-4-phosphate 5-kinase, type
I, beta"
/protein_id="AAH30587.1"
/db_xref="GeneID:8395"
/db_xref="HGNC:HGNC:8995"
/db_xref="MIM:602745"
/translation="MSSAAENGEAAPGKQNEEKTYKKTQVKNQILSRLPKIPCTFIQA
WTNTEMITLLACYYFRSVSTASSAIKGAIQLGIGYTVGNLTSKPERDVLMQDFYVVES
VFLPSEGSNLTPAHHYPDFRFKTYAPLAFRYFRELFGIKPDDYLYSICSEPLIELSNP
GASGSLFFVTSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCMQS
GGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHE
GLYFDTETYNALMKTLQRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDA
KRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGGIPAKSHRGEKLLLFTGIIDIL
QSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKR
CNSIAALKATSQEIVSSISQEWKDEKRDLLTEGQSFSSLDEEALGSRHRPDLVPSTPS
LFEAASLATTISSSSLYVNEHYPHDRPTLYSNRFKMATSEH"
BASE COUNT 1049 a 690 c 668 g 906 t
ORIGIN
1 gagctccttt gagagttgtg gaccagtcag acacaaaatt atctttaaat atacagatag
61 ggatgaggaa gccaaggccc agcagagctg agatgtgact gcagagccgt ccaaccccag
121 tcctgtgacc tttctctggt gcctgatacc tctcagcatt tgagggcctt tttctcttcc
181 tgcttcatct ctaaaggtcc ttctaggaga gaggtgaaag aaacctggca aagaaaacgg
241 tctcgacaat gagtaggcca cccatcacta ctaactacag atgacttgcc atttcattta
301 caaagatgtc ttctgctgct gaaaatggag aggcagcacc tggaaaacaa aatgaagaaa
361 aaacctataa aaagacacaa gtgaaaaacc aaatcctgtc tcgtttaccc aagattccgt
421 gtacattcat tcaagcatgg accaacacag agatgattac gttgctagcc tgttattact
481 tcagatcagt ttcaactgca tcatctgcta ttaaaggtgc tattcagctg ggaataggat
541 acacagtggg taatctcact tccaagccag aacgagatgt tcttatgcaa gacttttatg
601 tggtggaaag tgtgttccta cccagcgaag ggagcaatct gaccccagca catcactacc
661 cagactttag atttaagaca tacgctccat tagcattccg atatttcaga gaactttttg
721 gtatcaagcc tgatgattac ttgtattcca tctgcagtga acctctaata gaactgtcta
781 accctggagc cagtggatcc ttgttttttg tgaccagtga tgatgaattt atcatcaaaa
841 cagttcagca caaagaagct gagtttcttc agaagctact gccaggctat tacatgaatt
901 taaaccagaa tccaaggact cttttgccaa aattttacgg actgtattgt atgcaatcag
961 gaggcattaa tatcaggatt gtggtgatga acaacgtttt gccacgctcc atgagaatgc
1021 actttacata tgacttgaaa ggctcaacgt ataagcgaag agcatcccgt aaagagagag
1081 agaaatccaa ccccacattt aaggacttag atttcctgca agacatgcac gaagggttgt
1141 attttgatac ggaaacatac aacgcgctta tgaaaacact tcagagagac tgccgggtgc
1201 tagaaagctt caagatcatg gattatagcc ttctgttggg aattcatttc ctggaccatt
1261 ccctcaaaga gaaagaggag gagaccccac aaaatgtgcc tgatgctaag cggactggga
1321 tgcagaaggt tctctactca acagccatgg aatctatcca gggtccaggg aaatctggag
1381 atgggataat cacagagaac ccagacacaa tgggaggcat tccagctaaa agccataggg
1441 gagaaaaact acttttattt acgggcatta ttgacattct gcaatcatat aggttaatga
1501 agaagttaga acattcctgg aaagctcttg tttatgatgg ggacactgtt tctgttcata
1561 gaccaagctt ttatgcagac agatttctta agttcatgaa ttccagagtt ttcaagaaaa
1621 ttcaagcttt gaaggcttca ccgtctaaga aacggtgcaa ttcaatcgcc gccctaaagg
1681 ccacttcaca ggagattgtg tcctcaatta gccaggaatg gaaggatgag aagcgggatt
1741 tgctgactga aggacaaagt tttagcagcc ttgatgaaga agccctggga tcccgacaca
1801 ggccagacct ggtccctagc actccatcac tgtttgaagc tgcttccttg gcaaccacaa
1861 tttcatcttc ttccttatac gtcaatgagc actatccaca cgacaggcct acactctatt
1921 caaacaggtt caagatggca acatcagagc attaaactaa gcaagcagtc ctgtgtgtgg
1981 ctcacacctg taatcccagc actttgcgag gccgaggcag actgatctct tgagtccgga
2041 agttcaagac cagcctgggc aatatgctca atccatctga gcacctgtta ttcatatcag
2101 aaggaaatga aatcaatagc attttcttcc ccagtggcag tctttaaact tccttctctt
2161 ttgccagatg agaaggttca gcctagttct tcagtggttc catacttaaa ccatccaaaa
2221 atacagaaaa acatcaagca acccaaatca tgtgggacat tctgcagtat acctgatgag
2281 tactcttcag aactgtcaag gtcatcaaaa acaagaagtc taaaaaacca tcacagtcta
2341 tgagagccta aggagatgtg acacctaaat gtcacatggt atccagagtg ggactctgga
2401 acggaaaaag gcattaagga aaatgaacaa aatctggata tagtatggag caaagggtta
2461 ccttccagtt caacatttac cttggaagag gggaccatct acttgaccgc tgagcccaac
2521 actctggaag tgcaggatga caatgcttct gtgcttgacg tctatttata agtgaaaatg
2581 gtgatcacct aagcacatgg atgagacgtg agcacagtta tggcagagaa gtttctccgc
2641 accagaatta tccacagcaa cttggctgag ccccactaca cacagagaaa tcatcaacct
2701 gacttaagag ttttcaagat gtcaacttca ggctgatcag cagatgggat gtgaaaaata
2761 ctaccctatt ctatcatttg ctgttgcttg ctgaactgtg aagaactgca tgaactatat
2821 ttaagctgct ttctgtacca ttgccaatca cctttttgga gttggaagtg ctattttcct
2881 atggactttt gcattatttc attgtgcatg catccagtga ttatacataa gcaacatatg
2941 taatctgctt atatattttt aaaaatccat ccacacacat ggtaaattaa gtataaattc
3001 ttttgcaaaa ttatagttca tgtcattgaa agtttaaatt ggtttcattt aaagatcaat
3061 atactaggtc tgccttcact ttatagaaaa ctagcttcta taaagatttt tttcactgtt
3121 tactagtgaa atgagaaaag caaagctatt tataaaaggc cttatgtcgt gtacatacat
3181 tgtctttgaa atatttgtga tctagtttat tgcttgtaaa agagaaatta tataatttat
3241 ttagtaaata ctactgtaaa ctatagtttt gtgagagaaa taaaatattt tgttcccaaa
3301 aaaaaaaaaa aaa
//