LOCUS BC030586 2774 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens signal transducing adaptor molecule (SH3 domain and
ITAM motif) 1, mRNA (cDNA clone MGC:26363 IMAGE:4820857), complete
cds.
ACCESSION BC030586
VERSION BC030586.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2774)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2774)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC030586.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: a Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21265027.
FEATURES Location/Qualifiers
source 1..2774
/db_xref="H-InvDB:HIT000041055"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26363 IMAGE:4820857"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2774
/gene="STAM"
/gene_synonym="STAM1"
/db_xref="GeneID:8027"
/db_xref="MIM:601899"
CDS 159..1370
/gene="STAM"
/gene_synonym="STAM1"
/codon_start=1
/product="STAM protein"
/protein_id="AAH30586.1"
/db_xref="GeneID:8027"
/db_xref="MIM:601899"
/translation="MPLFATNPFDQDVEKATSEMNTAEDWGLILDICDKVGQSRTGPK
DCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHP
KVCEKLKALMVEWTDEFKNDPQLSLISAMIKNLKEQGVTFPAIGSQAAEQAKASPALV
AKDPGTVANKKEEEDLAKAIELSLKEQRQQSTTLSTLYPSTSSLLTNHQHEGRKVRAI
YDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVTAYLTAEPEMIK
TEKKTVQFSDDVQVETIEPEPEPAFIDEDKMDQLLQMLQSTDPSDDQPDLPELLHLEA
MCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNEDPMYSMYAKLQNQPG
SGPTIRKPSPS"
BASE COUNT 848 a 560 c 556 g 810 t
ORIGIN
1 gcggttggtg gggttgggtg agaggaggag ctgtcgcgga ccctgtagag tcggtctctg
61 ttgctctttt tgcctgagga gtcttccatc ctacgtcgag ctctgactcc cgtgctgtcg
121 agagggagtc cccggggaca cctcggcacg cagcggagat gcctcttttt gccaccaatc
181 ccttcgatca ggatgttgag aaagcaacca gcgagatgaa tactgctgag gactggggcc
241 tcattttgga tatctgtgat aaagttggtc agtctcgcac tggacctaag gattgtcttc
301 ggtctattat gagaagagtg aaccacaaag atcctcacgt tgctatgcag gctttgactc
361 ttctaggagc atgtgtatca aactgtggca aaatttttca tttagaagta tgttcaagag
421 attttgctag tgaagtaagc aacgtattaa ataagggtca tcctaaagta tgtgaaaaat
481 taaaggctct tatggttgaa tggacagatg aatttaagaa tgatccacag cttagtctaa
541 tatcagcaat gattaagaac cttaaggaac aaggagttac gttcccagct attggctctc
601 aggctgcaga acaagcaaaa gcaagcccag ctcttgtagc caaggatcct ggtactgtgg
661 ctaacaaaaa agaagaagaa gatttagcaa aagccattga gttgtctctc aaggaacaaa
721 ggcagcagtc aaccaccctt tccactttgt atccaagcac atccagtctc ttaactaacc
781 accaacatga aggccgaaaa gttcgtgcta tatatgactt tgaagctgct gaagacaatg
841 aacttacttt taaagctgga gaaattatta cagttcttga tgacagtgat cctaactggt
901 ggaaaggtga aacccatcaa ggcatagggt tatttccttc taattttgtg actgcatatc
961 tcactgctga accagaaatg attaaaacag agaagaagac ggtacaattt agtgatgatg
1021 ttcaggtaga gacaatagaa ccagagccgg aaccagcctt tattgatgaa gataaaatgg
1081 accagttgct acagatgctg caaagtacag accccagtga tgatcagcca gacctaccag
1141 agctgcttca tcttgaagca atgtgtcacc agatgggacc tctcattgat gaaaagctgg
1201 aagatattga tagaaaacat tcagaactct cagaacttaa tgtgaaagtg atggaggccc
1261 tttccttata taccaagtta atgaacgaag atccgatgta ttccatgtat gcaaagttac
1321 agaatcagcc aggcagtggt cccaccatcc gcaaacccag cccttcctag tcagcagact
1381 caggccgctt acccaaatac aatggtcagt tccgttcaag gaaacacata tcccagccag
1441 gcgccagtat atagtcctcc tcctgccgct actgctgctg ctgcaactgc cgatgtcact
1501 ctgtaccaga atgcaggacc taatatgccc caggtgccaa actataactt aacatcatca
1561 actctgcctc agcccggagg cagccaacag ccacctcagc cacagcaacc atattctcag
1621 aaggctctgc tataggaccc ggtgttcctc ttggtggcag atacctgcta aatgccactg
1681 acaatgttat gagattcatt actatcttaa gatgtgttta tcctcagctt ataggaatct
1741 ctccaggtca acaggttcaa atattcaaga aggtagaact ctcctcaatt tacactgact
1801 ttttagaggt tcttcccccc ccgcccctgc agaggaatga aactacttac aacatttaat
1861 tcctttcata atatgaaaga attgatacaa ggctatttgt ctcgtaaacc tggtctgcag
1921 aaagtcaaac ttacaaaaac tgttgtgaca aatgttatgt acatatattg atatgtaact
1981 gcattagtgg ccattttgaa tcacagtggt gatcgtgtga atatatttaa cactgtgtta
2041 aattaattta cgttgctatt ttattttaat cataaacaac taccatgttt cttaatgttt
2101 tgtgtaaatt taaggtaatt atactatcct tttaaacttc aagaaaacaa agttgttagc
2161 gtatttacat gaaggcgcat tatgttgtcg tgtgtttcag tttcacatta aactgaacct
2221 tttactaatt gtgagctaaa gagatatata tatatatgtg tgtgtatata tatatatcta
2281 catgtctttc tgtagcctct gcatactact ggctgtcatc acaccagcgt acagtagcta
2341 aatttttggt gcaattatag caaatgataa tgttcccttt tgaactttta cattttggca
2401 tgacatttca gagtattgtg ggaccatgag acaaaattaa gtacgatcac attctttatt
2461 tctcatttta aagaaatgat gttggtttac cttttcctag ttgaagatag taattaggtt
2521 tctaagctgt atactgtgtt tattggtggc agtgacacca aagatagagg caatggatag
2581 aaatttttaa actggaaaga aaacctgaat tacactacat tttcgaagtc tcttgtaatt
2641 atttgggata tcaacaaaat ttgattcgtc tgtctaatcc cttgctagta ttttaaatat
2701 gtctttaaca cattgtatcc tttaattctt cattaaaatg gaaataagta gatgttccaa
2761 aaaaaaaaaa aaaa
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