LOCUS BC030577 4919 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens G protein-coupled receptor 85, mRNA (cDNA clone
MGC:26047 IMAGE:4823671), complete cds.
ACCESSION BC030577
VERSION BC030577.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4919)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4919)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377760.
FEATURES Location/Qualifiers
source 1..4919
/db_xref="H-InvDB:HIT000050993"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26047 IMAGE:4823671"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4919
/gene="GPR85"
/gene_synonym="SREB"
/gene_synonym="SREB2"
/db_xref="GeneID:54329"
/db_xref="HGNC:HGNC:4536"
/db_xref="MIM:605188"
CDS 579..1691
/gene="GPR85"
/gene_synonym="SREB"
/gene_synonym="SREB2"
/codon_start=1
/product="G protein-coupled receptor 85"
/protein_id="AAH30577.1"
/db_xref="GeneID:54329"
/db_xref="HGNC:HGNC:4536"
/db_xref="MIM:605188"
/translation="MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISIL
LVKDKTLHRAPYYFLLDLCCSDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGV
LSCFHTAFMLFCISVTRYLAIAHHRFYTKRLTFWTCLAVICMVWTLSVAMAFPPVLDV
GTYSFIREEDQCAFQHRSFRANDSLGFMLLLALILLATQLVYLKLIFFVHDRRKMKPV
QFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTLLGIRQNANTTGRRRLLVLDE
FKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGFLTAAVWMSFAQAGI
NPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI"
BASE COUNT 1499 a 898 c 942 g 1580 t
ORIGIN
1 agcggactgt agagaagatt tttatttttt gtttcattaa cagattatta taaagcaaaa
61 agcatgcaga aaaagaagca gacgttttac attgggaatt aatgaaagcg tgtctgctag
121 ttttgggtag gagaactggg aagttgttgc ttaaaatttt atatcacctc cacaaacaaa
181 actcttcgga aatggtaaaa taagaaaatg catgattcta gaggcattcc taagcaccca
241 cgtgtcaggc tttgtggtgt ctgtggtatc atccgaccgt ttggactggt tagggcttac
301 tgagagctcc atttctggaa agccttacaa gactgaggaa tatcagactg cgaatcaccg
361 ggaacggttc ctttgcagca cagaagcaat ctctctcccc atcttcgcat attctgatgg
421 caaaacaagt ggaagaaaag aggaagcatg actgcagatc agatcagttc tctttgtgga
481 ttatattttc agtaaaatgt atggatctat cttttccttg ttcttatatc tagatcatga
541 gacttgactg aggctgtatc cttatcctcc atccatctat ggcgaactat agccatgcag
601 ctgacaacat tttgcaaaat ctctcgcctc taacagcctt tctgaaactg acttccttgg
661 gtttcataat aggagtcagc gtggtgggca acctcctgat ctccattttg ctagtgaaag
721 ataagacctt gcatagagca ccttactact tcctgttgga tctttgctgt tcagatatcc
781 tcagatctgc aatttgtttc ccatttgtgt tcaactctgt caaaaatggc tctacctgga
841 cttatgggac tctgacttgc aaagtgattg cctttctggg ggttttgtcc tgtttccaca
901 ctgctttcat gctcttctgc atcagtgtca ccagatactt agctatcgcc catcaccgct
961 tctatacaaa gaggctgacc ttttggacgt gtctggctgt gatctgtatg gtgtggactc
1021 tgtctgtggc catggcattt cccccggttt tagacgtggg cacttactca ttcattaggg
1081 aggaagatca atgcgccttc caacaccgct ccttcagggc taatgattcc ttaggattta
1141 tgctgcttct tgctctcatc ctcctagcca cacagcttgt ctacctcaag ctgatatttt
1201 tcgtccacga tcgaagaaaa atgaagccag tccagtttgt agcagcagtc agccagaact
1261 ggacttttca tggtcctgga gccagtggcc aggcagctgc caattggcta gcaggatttg
1321 gaaggggtcc cacaccaccc accttgctgg gcatcaggca aaatgcaaac accacaggca
1381 gaagaaggct attggtctta gacgagttca aaatggagaa aagaatcagc agaatgttct
1441 atataatgac ttttctgttt ctaaccttgt ggggccccta cctggtggcc tgttattgga
1501 gagtttttgc aagagggcct gtagtaccag ggggatttct aacagctgct gtctggatga
1561 gttttgccca agcaggaatc aatccttttg tctgcatttt ctcaaacagg gagctgaggc
1621 gctgtttcag cacaaccctt ctttactgca gaaaatccag gttaccaagg gaaccttact
1681 gtgttatatg agggagcatc tgtaaatctt tagccttgtg aaaactaacc ttctctgctg
1741 agcaattgtg gcccatagcc atattttgag aagaaattca agaatggaat cagcagtttt
1801 aaggatttgg gcaacattct gcagtctttg caatagttca cctataatcc tattttaaat
1861 ctcagagtga tcctgctgac tgccagcaaa ggtttgtaat taagaaggga ctgaaccact
1921 gccctaagtt tctttatgtg gtcaaaaact agataatgaa agtagcaggt gctaagtatc
1981 agtgctaaat gctctgtatg tcactacata tgaaaaaaca tcaaaaaaca attagcattg
2041 gacatcttaa taaattaagt tgacatgagg taaatgtgtt gataaaaact aattttagaa
2101 gtttgaagac tttaaaacat ttcatactac tattgttttg caaagactaa aatatttggg
2161 gacttaaagt actgtaatcc actaaagacg tgccaatgaa ttattggaat atcacacttt
2221 aaaaaccgcc ttgtaagttc tggggagcat tccaaagcag tatattggtt ccaattagag
2281 tttacttttt ttgtattaat acattgctat ttctaaatac cactttcctc atctactagt
2341 aagattgcta gcattgaact gtattatgtg gtttttgttg atttggtata aagtttttcc
2401 aattcattta tattttacaa atgctagata ttggtctggg aggcaacatt aatggtacca
2461 gcctgtcaca actgagcagt tctaataatg cagaataaat acatgttgcc ttaaagggtt
2521 atctagtatc cttcatctta tttagcactg gagcaaatag ccaagggaaa tcaaatcagt
2581 aactggtcat ggtcatgcat ctaaaagtgc atggaagatc atttattact ttttcctttt
2641 ttctcacatg gtttgaaact taaagtgcac atcactgaaa taatgagatt ttcttctacg
2701 gtgtgctacc ctttctaaac tgttctaaga agcaggcagt tgatgtatgt ttatatttta
2761 agtcagctgt caaggggaga ccacagcctt agtatgacat cctgcacaat ttgtgaagca
2821 tttattctac tgaaggcaca gtcttgttta tactttctgc acattcagtg tattggtaat
2881 ttaaattatt tcagttttaa cttgtgaaag cttatattat gatttctggt attttagaaa
2941 tacattagag tctgtgagtc tcattcttta agatacagat atgtgaactt caatataaag
3001 ttgcatttgc caaaatttac ccgtgtagcc tgttaatttt cttgaaataa gttttacatt
3061 tttggcacat aacaacgttt tttttaattt gggaggcaag cacaaactag gaagactagc
3121 tttattatgg ttttgctttt tgattcttgt agctactata ttccagactg gaaatgtatg
3181 aatgataatc aacataatgc tgataaactg acataatatt atctgtaaaa gcattatttg
3241 gtagtttatt ataatcatcc ctctattatt cttaaatgcc agtagtattt agagatgtgt
3301 acctgcttag ttaattggct cagaatttta atataaacat cacactttaa tttggagcat
3361 agtaccatag aaatttgggg ttctaaatat acaacttgta agaagaatgg tttacactaa
3421 cattatgaca aaactagaaa aagttattat ttttgtttgc tttctgttgt tttgtttatt
3481 ggttggtttt tgtgaagttt attttttttt ggtatttgat aattaagatt aggaatctaa
3541 taacacagaa ttccatattg ctatagtact tctgtaaaga gaatatcaat ataaataagg
3601 aaaataaatc aatgaaatgt ttcaatgata tatgcaacta ttcagttttg ctcttataag
3661 gacagctcaa gccatgaatt agtgagcatt ctgacctcat ttttacttta caccaaagtt
3721 gattagatct gagacaaaat ttaatgcaca acagtgagtt ggatctagca ataaagtctc
3781 cttggtactg aaatcattat ctaaaataaa ggaaatgtta tcaaaagatg ttctgataac
3841 attgtgattg taactcaaaa aaatttatag tagaaacgta attgcaatga tgataataac
3901 taactctgct tagaggttca aatatcacca gcaatcagta aaaaattcag caataatctt
3961 aaggccagag agaacaggtt caccattgca tagacaagaa aacagatatg ggttaagagt
4021 tggggactga ggagtcaaga gcaacggcca cgtgaagctg cctgactcca cctagctatt
4081 tggaataacc gattcccaca gttttggtaa gaaaccagcc ccagtaatca gtaagtcagg
4141 ctgaactgca gtgactttta tttaagccta ctcctgacta acttggcatt tgcaggtcaa
4201 gcaggaagca gttgacaaga cacatcctca gtgaatcaat gccatttgta actcaactgg
4261 taacagtagt aatcatacaa aataaaaacc tgcttcagtg tcttaatgac caaatcacat
4321 tatctatttt agcactcatt ccaaaattca gtatttaatg taattaatct ttaatccata
4381 aaaatacatc cccactgtag cggggcaggg ggtgtccaac ttccctgtga gactgattat
4441 caataataat gtgtctccct cttggactga gcacacatct gagctgaacg gcctttaaat
4501 tgtttttcat aatagtggtg atatgtttgc ttggatacgt ctgtactatt tcatctggtt
4561 cattttgcat gtaatagatt tatctgtgag atgcctggct gaagctaggc attcagtctg
4621 tgactgtgga atcctatgca ggtattaacc aaggcagaaa gaggtgagta acttgcccat
4681 ttctccacag agaccccatt taaataacac aaaattgacc atagtgatta gatgaaaaaa
4741 ttatttgtag ataggataat ctattgactg aattatcttt tgcagatatc agctggttgg
4801 atttctcacc aggattgtct atagaagtta actgatttat gattgttaac acataaatat
4861 ggccacttat ccatttgcct caacttcaaa aaaaaaaaaa aagaaaaaaa aaaaaaaaa
//