LOCUS BC030572 1623 bp mRNA linear HUM 12-OCT-2006
DEFINITION Homo sapiens general transcription factor IIE, polypeptide 2, beta
34kDa, mRNA (cDNA clone MGC:15295 IMAGE:3955818), complete cds.
ACCESSION BC030572
VERSION BC030572.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1623)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1623)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC030572.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222295.
FEATURES Location/Qualifiers
source 1..1623
/db_xref="H-InvDB:HIT000041048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15295 IMAGE:3955818"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1623
/gene="GTF2E2"
/gene_synonym="FE"
/gene_synonym="TF2E2"
/gene_synonym="TFIIE-B"
/db_xref="GeneID:2961"
/db_xref="HGNC:HGNC:4651"
/db_xref="MIM:189964"
CDS 248..1123
/gene="GTF2E2"
/gene_synonym="FE"
/gene_synonym="TF2E2"
/gene_synonym="TFIIE-B"
/codon_start=1
/product="general transcription factor IIE, polypeptide 2,
beta 34kDa"
/protein_id="AAH30572.1"
/db_xref="GeneID:2961"
/db_xref="HGNC:HGNC:4651"
/db_xref="MIM:189964"
/translation="MDPSLLRERELFKKRALSTPVVEKRSASSESSSSSSKKKKTKVE
HGGSSGSKQNSDHSNGSFNLKALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEI
LDETQHLDIGLKQKQWLMTEALVNNPKIEVIDGKYAFKPKYNVRDKKALLRLLDQHDQ
RGLGGILLEDIEEALPNSQKAVKALGDQILFVNRPDKKKILFFNDKSCQFSVDEEFQK
LWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAPIQRRKKPASQKKRRFKTHNEH
LAGVLKDYSDITSSK"
BASE COUNT 529 a 316 c 399 g 379 t
ORIGIN
1 cgggaagtgg cgggcggagt cccgggtcca gtcgccgcct cagctaccgc cgctgccgcc
61 gccgccgccg ccaccgccag tggtgagacc ccgacctggc gggtcagcgc tgggcgtgcg
121 tgcgggcagg cgggggcgct gacgagaagc aggaagaggg tgcagtgccg gcgtgggcgg
181 ccggccgagg cggaggcgca ggaagggggc ggcgagtcgt gcgaggctgc ccttctcact
241 cagcattatg gatccaagcc tgttgagaga aagggagctg ttcaaaaaac gagctctttc
301 tactcctgta gtagaaaaac gttcagcatc ttctgagtca tcatcatcat cgtcaaagaa
361 gaagaaaaca aaggtagaac atggaggatc gtcaggctct aaacaaaatt ctgatcatag
421 caatggatca tttaacttga aagctttgtc aggaagctct ggatataagt ttggtgttct
481 tgctaagatt gtgaattaca tgaagacacg gcatcagcga ggagatacgc atcctctaac
541 cttagatgaa attttggatg aaacacaaca tttagatatt ggactcaagc agaaacaatg
601 gctaatgact gaggctttag tcaacaatcc caaaattgaa gtaatagatg ggaagtatgc
661 tttcaagccc aagtacaacg tgagagataa gaaggcccta cttaggctct tagatcagca
721 tgaccagcga ggattaggag gaattctttt agaagacata gaagaagcac tgcccaattc
781 ccagaaagct gtcaaggctt tgggggacca gatactattt gtaaatcgtc ccgataagaa
841 gaaaatactt ttcttcaatg ataagagctg tcagttttct gtggatgaag aatttcagaa
901 actgtggagg agtgtcactg tagattccat ggacgaggag aaaattgaag aatatctgaa
961 gcgacagggt atttcttcca tgcaggaatc tggaccaaag aaagtggccc ctattcagag
1021 aaggaaaaag cctgcttcac agaaaaagcg acgctttaag actcataacg aacacttggc
1081 tggagtgctg aaggattact ctgacattac ttccagcaaa tagggaacag ttttgccctg
1141 gaacagagtt acagatacac aatcaagagt gttcttgctg atgctcgggg tctgaagact
1201 gtcttcctat ctgcttcttg cggctgagga gaggagcagt tcagtttaca aaacaagtgc
1261 aaattaccaa actcaaagct tatttgagta gaatgggctc atgggcaatg tgatgttccc
1321 tgttaacctt ctgttactcc ctgggagaaa ggcgctgagc gtggcatgca ggtgtctttg
1381 ctgtgttttt ctccacttct aaatggttcc tggttccttt cttcctcgtt tgttacttta
1441 gagcaagttt gcccatagtc ttgaatgcaa tatttgttta ttccaaaaga acatatttat
1501 aataaaatca ctgtagaagg atttttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaatta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaa
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