LOCUS BC030267 3732 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens ATPase type 13A2, mRNA (cDNA clone MGC:40082
IMAGE:5240813), complete cds.
ACCESSION BC030267
VERSION BC030267.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3732)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: l Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..3732
/db_xref="H-InvDB:HIT000041006"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40082 IMAGE:5240813"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3732
/gene="ATP13A2"
/gene_synonym="HSA9947"
/db_xref="GeneID:23400"
CDS 178..3654
/gene="ATP13A2"
/gene_synonym="HSA9947"
/codon_start=1
/product="ATP13A2 protein"
/protein_id="AAH30267.1"
/db_xref="GeneID:23400"
/translation="MSADSSPLVGSTPTGYGTLTIGTSIDPLSSSVSSVRLSGYCGSP
WRVIGYHVVVWMMAGIPLLLFRWKPLWGVRLRLRPCNLAHAETLVIEIRDKEDSSWQL
FTVQVQTEAIGEGSLEPSPQSQAEDGRSQAAVGAVPEGAWKDTAQLHKSEEAKRVLRY
YLFQGQRYIWIETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRKAIYGPNVISI
PVKSYPQLLVDEALNPYYGFQAFSIALWLADHYYWYALCIFLISSISICLSLYKTRKQ
SQTLRDMVKLSMRVCVCRPGGEEEWVDSSELVPGDCLVLPREGGLMPCDAALVAGECM
VNESSLTGESIPVLKTALPEGLGPYCAETHRRHTLFCGTLILQARAYVGPHVLAVVTR
TGFCTAKGGLVSSILHPRPINFKFYKHSMKFVAALSVLALLGTIYSIFILYRNRVPLN
EIVIRALDLVTVVVPPALPAAMTVCTLYAQSRLRRQGIFCIHPLRINLGGKLQLVCFD
KTGTLTEDGLDVMGVVPLKGQAFLPLVPEPRRLPVGPLLRALATCHALSRLQDTPVGD
PMDLKMVESTGWVLEEEPAADSAFGTQVLAVMRPPLWEPQLQAMEEPPVPVSVLHRFP
FSSALQRMSVVVAWPGATQPEAYVKGSPELVAGLCNPETVPTDFAQMLQSYTAAGYRV
VALASKPLPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLKPQTTPVIQALRRTRIR
AVMVTGDNLQTAVTVARGCGMVAPQEHLIIVHATHPERGQPASLEFLPMESPTAVNGV
KVLVQGTVFARMAPEQKTELVCELQKLQYCVGMCGDGANDCGALKAADVGISLSQAEA
SVVSPFTSSMASIECVPMVIREGRCSLDTSFSVFKYMALYSLTQFISVLILYTINTNL
GDLQFLAIDLVITTTVAVLMSRTGPALVLGRVRPPGALLSVPVLSSLLLQMVLVTGVQ
LGGYFLTLAQPWFVPLNRTVAAPDNLPNYENTVVFSLSSFQYLILAAAVSKGAPFRRP
LYTNERARPVPPRLPAPPPAQAGLQEALQAAGTRAGRAALAAAARRPPEVVQAHGHPR
HWNSLPLSHQLDPSPATPPPPPPTSLRLATVYTPPPRPPPPWGSVDYCPLPWTIPRRG
GSPQLPSVLLSV"
BASE COUNT 702 a 1244 c 1119 g 667 t
ORIGIN
1 cgccgagcct ggtggcccag gtgccccgcc cgcgtcagcc ctgctccagc cccgcgctag
61 cccagcgccc ctcgccccgg gccgtccgga ccgcgccccc gcccagggcc ttgcgcacgc
121 cggggcccag gccgagggcc gcagcgccgg ggccggcgat gagcgcgagg agccggcatg
181 agcgcagaca gcagccctct cgtgggcagc acgcccaccg gttatgggac cctgacgata
241 gggacatcaa tagatcccct cagctcctca gtttcatccg tgaggctcag cggctactgt
301 ggcagtccat ggagggtcat cggctatcac gtcgtggtct ggatgatggc tgggatccct
361 ttgctgctct tccgttggaa gcccctgtgg ggggtgcggc tgcggctccg gccctgcaac
421 ctggcccacg ccgaaacact cgttatcgaa ataagagaca aagaggatag ttcctggcag
481 ctcttcactg tccaggtgca gactgaggcc atcggcgagg gcagcctgga gccgtcccca
541 cagtcccagg cagaggatgg ccggagccag gcggcagttg gggcggtacc agagggtgcc
601 tggaaggata cggcccagct ccacaagagc gaggaggcga agcgggtgct gcggtattac
661 ctcttccagg gccagcgcta tatctggatc gagacccagc aagccttcta ccaggtcagc
721 ctcctggacc atggccgctc ttgtgacgac gtccaccgct cccgccatgg cctcagcctc
781 caggaccaaa tggtgaggaa ggccatttac ggccccaacg tgatcagcat accggtcaag
841 tcctaccccc agctgctggt ggacgaggca ctgaacccct actatgggtt ccaggccttc
901 agcatcgcgc tgtggctggc tgaccactac tactggtacg ccctgtgcat cttcctcatt
961 tcctccatct ccatctgcct gtcgctgtac aagaccagaa agcaaagcca gactctaagg
1021 gacatggtca agttgtccat gcgggtgtgc gtgtgccggc cagggggaga ggaagagtgg
1081 gtggactcca gtgagctagt gcccggagac tgcctggtgc tgccccggga gggtgggctg
1141 atgccctgtg atgccgccct ggtggccggc gagtgcatgg tgaatgagag ctctctgaca
1201 ggagagagca ttccagtgct gaagacggca ctgccggagg ggctggggcc ctactgtgca
1261 gagacacacc ggcggcacac actcttctgc gggaccctca tcttgcaggc ccgggcctat
1321 gtgggaccgc acgtcctggc agtggtgacc cgcacagggt tctgcacggc aaaagggggc
1381 ctggtgagct ccatcttgca cccccggccc atcaacttca agttctataa acacagcatg
1441 aagtttgtgg ctgccctctc tgtcctggct ctcctcggca ccatctacag catcttcatc
1501 ctctaccgaa accgggtgcc tctgaacgag attgtaatcc gggctctcga cctggtgacc
1561 gtggtggtgc cacctgccct gcctgctgcc atgactgtgt gcacgctcta cgcccagagc
1621 cgactgcgga gacagggcat tttctgcatc cacccactgc gcatcaacct ggggggcaag
1681 ctgcagctgg tgtgtttcga caagacgggc accctcactg aggacggctt agacgtgatg
1741 ggggtggtgc ccctgaaggg gcaggcattc ctgcccctgg tcccagagcc tcgccgcctg
1801 cctgtggggc ccctgctccg agcactggcc acctgccatg ccctcagccg gctccaggac
1861 acccccgtgg gcgaccccat ggacttgaag atggtggagt ctactggctg ggtcctggag
1921 gaagagccgg ctgcagactc agcatttggg acccaggtct tggcagtgat gagaccccca
1981 ctttgggagc cccagctgca ggcaatggag gagcccccgg tgccagtcag cgtcctccac
2041 cgcttcccct tctcttcggc tctgcagcgc atgagtgtgg tggtggcgtg gccaggggcc
2101 actcagcccg aggcctacgt caaaggctcc ccggagctgg tggcagggct ctgcaacccc
2161 gagacagtgc ccaccgactt cgcccagatg ctgcagagct atacagctgc tggctaccgt
2221 gtcgtggccc tggccagcaa gccactgccc actgtgccca gcctggaggc agcccagcaa
2281 ctgacgaggg acactgtgga aggagacctg agcctcttgg ggctgctggt catgaggaac
2341 ctactgaagc cgcagacaac gccagttatc caggctctgc gaaggacccg catccgcgcc
2401 gtcatggtga caggggacaa cctgcagaca gcggtgactg tggcccgggg ctgtggcatg
2461 gtggcccccc aggagcatct gatcatcgtc cacgccaccc accctgagcg gggtcagcct
2521 gcctctctcg agttcctgcc gatggagtcc cccacagccg tgaatggcgt taaggtcctg
2581 gtccagggca ctgtctttgc ccgcatggcc cctgagcaga agacagagct ggtgtgcgag
2641 ctacagaagc ttcagtactg cgtgggcatg tgcggagacg gcgccaatga ctgtggggcc
2701 ctgaaggcgg ctgatgtcgg catctcgctg tcccaggcag aagcctcagt ggtctcaccc
2761 ttcacctcga gcatggccag tattgagtgc gtgcccatgg tcatcaggga ggggcgctgt
2821 tcccttgaca cttcattcag cgtcttcaag tacatggctc tgtacagcct gacccagttc
2881 atctccgtcc tgatcctcta cacgatcaac accaacctgg gtgacctgca gttcctggcc
2941 atcgacctgg tcatcaccac cacagtggca gtgctcatga gccgcacggg gccagcgctg
3001 gtcctgggac gggtgcggcc accgggggcg ctgctcagcg tgcccgtgct cagcagcctg
3061 ctgctgcaga tggtcctggt gaccggcgtg cagctagggg gctacttcct gaccctggcc
3121 cagccatggt tcgtgcctct gaacaggaca gtggccgcac cagacaacct gcccaactac
3181 gagaacaccg tggtcttctc tctgtccagc ttccagtacc tcatcctggc tgcagccgtg
3241 tccaaggggg cgcccttccg ccggccgctc tacaccaatg agcgtgctag accagtgcct
3301 ccccgcctgc ctgcgccgcc tccggcccaa gcgggcctcc aagaagcgct tcaagcagct
3361 ggaacgagag ctggccgagc agccctggcc gccgctgccc gccggccccc tgaggtagtg
3421 caggcccacg ggcaccccag acactggaac tccctgcctc tgagccacca actggacccc
3481 tctccagcaa caccaccgcc accacctccc acatccctga ggttggcgac tgtctacact
3541 cctcccccga gaccaccccc accctgggga agcgttgact actgtcccct accttggacc
3601 atcccgcgta ggggtggcag cccccagctc ccctcagtgc tgctgtcagt gtagcaaata
3661 aagtcatgat attttcctgg caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3721 aaaaaaaaaa aa
//