LOCUS BC030229 900 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycoprotein IX (platelet), mRNA (cDNA clone MGC:34594
IMAGE:5226377), complete cds.
ACCESSION BC030229
VERSION BC030229.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 900)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676367.
FEATURES Location/Qualifiers
source 1..900
/db_xref="H-InvDB:HIT000040988"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34594 IMAGE:5226377"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..900
/gene="GP9"
/gene_synonym="CD42a"
/db_xref="GeneID:2815"
/db_xref="HGNC:HGNC:4444"
/db_xref="MIM:173515"
CDS 188..721
/gene="GP9"
/gene_synonym="CD42a"
/codon_start=1
/product="glycoprotein IX (platelet)"
/protein_id="AAH30229.1"
/db_xref="GeneID:2815"
/db_xref="HGNC:HGNC:4444"
/db_xref="MIM:173515"
/translation="MPAWGALFLLWATAEATKDCPSPCTCRALETMGLWVDCRGHGLT
ALPALPARTRHLLLANNSLQSVPPGAFDHLPQLQTLDVTQNPWHCDCSLTYLRLWLED
RTPEALLQVRCASPSLAAHGPLGRLTGYQLGSCGWQLQASWVRPGVLWDVALVTVAAL
GLALLAGLLCATTEALD"
BASE COUNT 189 a 317 c 257 g 137 t
ORIGIN
1 gccaggacct ttcaggccag acaggagcac ctgaccaaag gcttcacagc cgccctcacc
61 gcccggcctt ctacggtgtc cagagacagt tagccaggcc tgggctgggc acactccacc
121 ttccctagtc accagctggt ttcccagagg agaaggctga gacccgagaa gggagccagc
181 ctgtcccatg cctgcctggg gagccctgtt cctgctctgg gccacagcag aggccaccaa
241 ggactgcccc agcccatgta cctgccgcgc cctggaaacc atggggctgt gggtggactg
301 caggggccac ggactcacgg ccctgcctgc cctgccggcc cgcacccgcc accttctgct
361 ggccaacaac agccttcagt ccgtgccccc gggagccttt gaccacctgc cccagctgca
421 gaccctcgat gtgacgcaga acccctggca ctgtgactgc agcctcacct atctgcgcct
481 ctggctggag gaccgcacgc ccgaggccct gctgcaggtc cgctgtgcca gccccagcct
541 cgctgcccat ggcccgctgg gccggctgac aggctaccag ctgggcagct gtggctggca
601 gctgcaggcg tcctgggtgc gcccgggggt cttgtgggac gtggcgctgg tcaccgtggc
661 cgcgctgggc ctggctcttc tggctggcct gctgtgtgcc accacagagg ccctggattg
721 agccaggccc ccagaacccc tggctccagg ccagggggcc agtccctgag gcaggtcccc
781 agactccacc aagcctggtc agcccaaacc accagaagcc cagaataaac tggcagctca
841 gctgttttat ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//