LOCUS BC030221 4533 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ABI family, member 3 (NESH) binding protein, mRNA
(cDNA clone MGC:34158 IMAGE:5205716), complete cds.
ACCESSION BC030221
VERSION BC030221.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33667043.
FEATURES Location/Qualifiers
source 1..4533
/db_xref="H-InvDB:HIT000050988"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34158 IMAGE:5205716"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4533
/gene="ABI3BP"
/gene_synonym="NESHBP"
/gene_synonym="TARSH"
/db_xref="GeneID:25890"
/db_xref="HGNC:HGNC:17265"
/db_xref="MIM:606279"
CDS 66..3293
/gene="ABI3BP"
/gene_synonym="NESHBP"
/gene_synonym="TARSH"
/codon_start=1
/product="ABI family, member 3 (NESH) binding protein"
/protein_id="AAH30221.1"
/db_xref="GeneID:25890"
/db_xref="HGNC:HGNC:17265"
/db_xref="MIM:606279"
/translation="MRGGKCNMLSSLGCLLLCGSITLALGNAQKLPKGKRPNLKVHIN
TTSDSILLKFLRPSPNVKLEGLLLGYGSNVSPNQYFPLPAEGKFTEAIVDAEPKYLIV
VRPAPPPSQKKSCSGKTRSRKPLQLVVGTLTPSSVFLSWGFLINPHHDWTLPSHCPND
RFYTIRYREKDKEKKWIFQICPATETIVENLKPNTVYEFGVKDNVEGGIWSKIFNHKT
VVGSKKVNGKIQSTYDQDHTVPAYVPRKLIPITIIKQVIQNVTHKDSAKSPEKAPLGG
VILVHLIIPGLNETTVKLPASLMFEISDALKTQLAKNETLALPAESKTPEVEKISARP
TTVTPETVPRSTKPTTSSALDVSETTLASSEKPWIVPTAKISEDSKVLQPQTATYDVF
SSPTTSDEPEISDSYTATSDRILDSIPPKTSRTLEQPRATLAPSETPFVPQKLEIFTS
PEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPKISKSPEPTWTTPA
PGKTQFISLKPKIPLSPEVTHTKPAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVT
AKPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEE
LQTTLEETDQSTQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAP
RPSGADRNVSVDSTHPTKKPGTRRPPLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGP
ITTPPLRSTPRPTGTPLERIETDIKQPTVPASGEELENITDFSSSPTRETDPLGKPRF
KGPHVRYIQKPDNSPCSITDSVKRFPKEEATEGNATSPPQNPPTNLTVVTVEGCPSFV
ILDWEKPLNDTVTEYEVISRENGSFSGKNKSIQMTNQTFSTVENLKPNTSYEFQVKPK
NPLGEGPVSNTVAFSTESADPRVSEPVSAGRDAIWTERPFNSDSYSECKGKQYVKRTW
YKKFVGVQLCNSLRYKIYLSDSLTGKFYNIGDQRGHGEDHCQFVDSFLDGRTGQQLTS
DQLPIKEGYFRAVRQEPVQFGEIGGHTQINYVQWYECGTTIPGKW"
BASE COUNT 1556 a 1051 c 788 g 1138 t
ORIGIN
1 cactgggaga cagtccactt aaatgcagct ccagggttgc gaggcaccca ccagcatcat
61 tccccatgcg aggtggcaaa tgcaacatgc tctccagttt ggggtgtcta cttctctgtg
121 gaagtattac actagccctg ggaaatgcac agaaattgcc aaaaggtaaa aggccaaacc
181 tcaaagtcca catcaatacc acaagtgact ccatcctctt gaagttcttg cgtccaagtc
241 caaatgtaaa gcttgaaggt cttctcctgg gatatggcag caatgtatca ccaaaccagt
301 acttccctct tcccgctgaa gggaaattca cagaagctat agttgatgca gagccgaaat
361 atctgatagt tgtgcgacct gctccacctc caagtcaaaa gaagtcatgt tcaggtaaaa
421 ctcgttctcg caaacctctg cagctggtgg ttggcactct gacaccgagc tcagtcttcc
481 tgtcctgggg tttcctcatc aacccacacc atgactggac attgccaagt cactgtccca
541 atgacagatt ttatacaatt cgctatcgag aaaaggataa agaaaagaag tggatttttc
601 aaatctgtcc agccactgaa acaattgtgg aaaacctaaa gcccaacaca gtttatgaat
661 ttggagtgaa agacaatgtg gaaggtggaa tttggagtaa gattttcaat cacaagactg
721 ttgttggaag taaaaaagta aatgggaaaa tccaaagtac ctatgaccaa gaccacacag
781 tgccagcata tgtcccaagg aaactaatcc caataacaat catcaagcaa gtgattcaga
841 atgttactca caaggattca gctaaatccc cagaaaaagc tccactggga ggagtgatac
901 tagtccacct tattattcca ggtcttaatg aaactactgt aaaacttcct gcatccctaa
961 tgtttgagat ttcagatgca ctcaagacac aattagctaa gaatgaaacc ttggcattac
1021 ctgccgaatc taaaacacca gaggttgaaa aaatctcagc acgacccaca acagtgactc
1081 ctgaaacagt tccaagaagc actaaaccca ctacgtctag tgcattagat gtttcagaaa
1141 caacactggc ttcaagtgaa aagccatgga ttgtgcctac agctaaaata tctgaagatt
1201 ccaaagttct gcagcctcaa actgcaactt atgatgtttt ctcaagccct acaacatcag
1261 atgagcctga gatatcagat tcctacacag caacaagtga tcgtattctg gattctatcc
1321 cacctaaaac ttctagaact cttgaacagc caagggcaac actggctcca agtgaaacac
1381 catttgttcc tcaaaaactg gaaatcttta ccagtccaga aatgcagcct acgacacctg
1441 ctccccagca aactacatct atcccttcta cacctaaacg acgcccccgg cccaaaccgc
1501 caagaaccaa acctgaaaga accacaagtg ccggaacaat tacacctaaa atttctaaaa
1561 gccctgaacc tacatggaca acaccggctc ccggtaaaac acaatttatt tctctgaaac
1621 ctaaaatccc tctcagccca gaagtgacac acaccaaacc tgctcccaag cagacaccac
1681 gtgctcctcc taagccaaaa acatcaccac gcccaagaat cccacaaaca caaccagttc
1741 ctaaggtgcc ccagcgtgtt actgcaaaac caaaaacgtc accaagtcca gaagtgtcat
1801 acaccacacc tgctccaaaa gatgtgctcc ttcctcataa accataccct gaggtctctc
1861 agagcgaacc tgctcctcta gagacacgag gcatcccttt tatacccatg atttccccaa
1921 gtcctagtca agaggaacta cagaccactc tggaagaaac agaccaatcc acccaagaac
1981 ctttcacaac taagattcca cgaacaactg aactagcaaa gacaactcag gcgccacaca
2041 gattttatac tactgtgagg cccagaacat ctgacaagcc acacatcaga cctggggtca
2101 agcaagcacc caggccatca ggtgctgata gaaatgtatc agtggactct acccacccca
2161 ctaaaaagcc agggactcgc cgcccaccct tgccacccag acctacacac ccacgaagaa
2221 aacctttacc accaaataat gtcactggaa agccaggaag tgcaggaatc atttcatcag
2281 gcccaataac tacaccaccc ctgaggtcaa cacccaggcc tactggaact cccttggaga
2341 gaatagagac agatataaag caaccaacag ttcctgcctc tggagaagaa ctggaaaata
2401 taactgactt tagctcaagc ccaacaagag aaactgatcc tcttgggaag ccaagattca
2461 aaggacctca tgtgcgatac atccaaaagc ctgacaacag tccctgctcc attactgact
2521 ctgtcaaacg gttccccaaa gaggaggcca cagaggggaa tgccaccagc ccaccacaga
2581 acccacccac caacctcact gtggtcaccg tggaagggtg cccctcattt gtcatcttgg
2641 actgggaaaa gccactaaat gacactgtca ctgaatatga agttatatcc agagaaaatg
2701 ggtcattcag tgggaagaac aagtccattc aaatgacaaa tcagacattt tccacagtag
2761 aaaatctgaa accaaacacg agttatgaat tccaggtgaa acccaaaaac ccgcttggtg
2821 aaggcccggt cagcaacaca gtggcattca gtactgaatc agcggaccca agagtgagtg
2881 agccagtttc tgcaggaaga gatgccatct ggactgaaag accctttaat tcagactctt
2941 actcagagtg taagggcaaa caatatgtca aaaggacatg gtataaaaaa tttgtaggag
3001 tgcagctgtg caactctctc agatacaaga tttacttgag cgactccctc acaggaaaat
3061 tttataacat aggtgatcag aggggccatg gagaagatca ctgccagttt gtggattcat
3121 ttttagatgg acgcactggg cagcaactca cttctgacca gttaccaatc aaagaaggtt
3181 atttcagagc agttcgccag gaacctgtcc aatttggaga aataggtggt cacacccaaa
3241 tcaattatgt tcagtggtat gaatgtggga ctacaattcc tggaaaatgg tagatgctgc
3301 acaaagttac cttctgtttc atcattgcaa acaaaaatca ttgaaaatac tatgccgcat
3361 tcatttaaag ctattttgtt tactatgtat aaaagtctac aatctaatta atagcaatac
3421 tagatgttta ttattagaaa agattgctga gagtatttat caggttttac aaagtcattt
3481 taagaaagca agatactgat gttaacagaa taacattttt ggggaagctg gctccctatt
3541 catggtattt taagagatca tttgtatatt atttatcaca ctgttgtaat gatgttttga
3601 gatactttta taacaaaatt aacatcaaaa aggtatatac tttttaaaaa aaatttactt
3661 ttattgatgt gtactcttcc tattgatgag ttaattccat aaatctctac ttagtttaac
3721 ttattggatc aaattatctt cagcatgtat atctggggaa aaaaggtccg aattttcaca
3781 tttatattta aacttcaatt ttttatattt aaacttcaat tttttagcaa cagctgaata
3841 gctttgcgga ggagtttaat agttacacat tcatgctaat atacatttcc tttaaacatc
3901 cacaaattct taaaaagatt gaatcagtaa atttcatttc agctaaaaat ggagtctaat
3961 atattgtttc aaaagataca tttttaccca ccataaatgt tacaatatct gaatatgctt
4021 tgtcaaacta tccctttatg caatcgtctt catattgttt ttatgattct aatcaagctg
4081 tatgtagaga ctgaatgtga agtcaagtct gagcacaaaa agataatgca caatgagatt
4141 gcctaccatt ttataggata tttactatgt atttatacgt taagacctct atgaatgaat
4201 gtatcagaga atgtctttgt aactaactgt ttaattcaat ctgtaataaa aatctaacta
4261 actaactcat ttatttctat taaaaaggta ttgtccttta ggcggggaat gggaatcctt
4321 gctgcactgt tgcagtcatt ctgaaaggac ctttccctgt acttaccttt caacatgctt
4381 caatcttatc aacgctacat tttgtatttt tcaaacaggt ataaattctg caataaagag
4441 atgtagtttt tttttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//