LOCUS BC030199 1573 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 18 open reading frame 1, mRNA (cDNA clone
MGC:34709 IMAGE:5199354), complete cds.
ACCESSION BC030199
VERSION BC030199.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1573)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1573)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51093715.
FEATURES Location/Qualifiers
source 1..1573
/db_xref="H-InvDB:HIT000092073"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34709 IMAGE:5199354"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1573
/gene="C18orf1"
/db_xref="GeneID:753"
/db_xref="HGNC:HGNC:1224"
/db_xref="MIM:606571"
CDS 660..1526
/gene="C18orf1"
/codon_start=1
/product="chromosome 18 open reading frame 1"
/protein_id="AAH30199.1"
/db_xref="GeneID:753"
/db_xref="HGNC:HGNC:1224"
/db_xref="MIM:606571"
/translation="MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE
ENCLLVTEHPPPGIFNSELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQ
SRRREDGLPQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE
EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSG
ISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVP
IKGKDRKPGNLV"
BASE COUNT 339 a 500 c 465 g 269 t
ORIGIN
1 ccgagccccg gaggaagcag gcgtgtgttg aatttctctc tgcccctcac cttggaataa
61 acaggaagcg acaagcaccc agcccggccc ggcacttgcc tttgtgaagg ggtctgccct
121 gcacagcctt taggaagctt cctcgggacc ccttcccggt gcgccgcccc gggtgggcct
181 gggggcgcgc cctcggttca agctctacgt tcgtgacatc aaacctcctg ttgggccatt
241 tccgagaact cccatcagtt tctgtatagt gtaaaagttt cagaggcgga gcacagagag
301 ctgcggctgg gacaaggagc acccgcgtgc aggtgcgacc ctgcaggatg ctggcagcgg
361 cgtggccagg ggcgcccgtg ttctgagggc ctgagggcca gcccctccac ccgcgccatg
421 gcctccgcgc cctggctgga cggctgacgg gagcagggac cgccgccgcc caggtgccac
481 acccaggtac cgcccgcccg cgcgagagcc gggcaggtgg gccgcggatg ctcccagagg
541 ccggcccagc agagcgatgg acttggacag gctaagatgg aagtgacctg agcctcgccc
601 ggcggcttcc tcgacgggac agcgcaagag ttggagcaca ggcttgtccg gggagcagta
661 tgccggaagc tggttttcag gccacaaatg ctttcacaga gtgcaaattc acctgcacca
721 gtggtaaatg cttgtatctt ggttcgctgg tctgtaacca acagaacgac tgtggggaca
781 acagtgacga agagaactgt ctcctggtga ccgagcaccc gcctccgggc atcttcaact
841 cggagctgga gttcgcccaa atcatcatca tcgtcgtggt ggtcacggtg atggtggtgg
901 tcatcgtctg cctgctgaac cactacaaag tctccacgcg gtccttcatc aaccgcccga
961 accagagccg gaggcgggag gacgggctgc cgcagatcat gcatgccccg cggtccaggg
1021 acaggttcac agcgccgtcc ttcatccaga gggatcgctt cagccgcttc cagcccacct
1081 acccctatgt gcagcacgag attgatcttc ctcccaccat ctccctgtcc gacggtgaag
1141 agccacctcc ttaccagggg ccctgcaccc tgcagctccg ggaccctgaa cagcagatgg
1201 aactcaaccg agagtccgtg agggccccac ccaaccgaac catatttgac agtgatttaa
1261 tagacattgc tatgtatagc gggggtccat gcccacccag cagcaactcg ggcatcagtg
1321 caagcacctg cagcagtaac gggaggatgg aggggccacc ccccacatac agcgaggtga
1381 tgggccacca cccaggcgcc tctttcctcc atcaccagcg cagcaacgca cacaggggca
1441 gcagactgca gtttcagcag aacaatgcag agagcacaat agtacccatc aaaggcaaag
1501 ataggaagcc tgggaacctg gtctgattcc ttccaacgtg cacttcagct ggagaaagaa
1561 accaagaagg gaa
//