LOCUS BC030160 1300 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens eukaryotic translation initiation factor 5A, mRNA
(cDNA clone MGC:29713 IMAGE:5022012), complete cds.
ACCESSION BC030160
VERSION BC030160.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1300)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1300)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC030160.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: n Column: 5.
FEATURES Location/Qualifiers
source 1..1300
/db_xref="H-InvDB:HIT000040969"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29713 IMAGE:5022012"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1300
/gene="EIF5A"
/gene_synonym="EIF-5A"
/gene_synonym="EIF5A1"
/gene_synonym="uORF"
/gene_synonym="uORF A"
/db_xref="GeneID:1984"
/db_xref="HGNC:HGNC:3300"
/db_xref="MIM:600187"
CDS 113..577
/gene="EIF5A"
/gene_synonym="EIF-5A"
/gene_synonym="EIF5A1"
/gene_synonym="uORF"
/gene_synonym="uORF A"
/codon_start=1
/product="eukaryotic translation initiation factor 5A"
/protein_id="AAH30160.1"
/db_xref="GeneID:1984"
/db_xref="HGNC:HGNC:3300"
/db_xref="MIM:600187"
/translation="MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMS
TSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLL
QDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK"
BASE COUNT 329 a 339 c 346 g 286 t
ORIGIN
1 gtagaggcgg cggcggcggc ggcagcgggc tcggaggcag cggttgggct cgcggcgagc
61 ggacggggtc gagtcagtgc gttcgcgcga gttggaatcg aagcctctta aaatggcaga
121 tgacttggac ttcgagacag gagatgcagg ggcctcagcc accttcccaa tgcagtgctc
181 agcattacgt aagaatggct ttgtggtgct caaaggccgg ccatgtaaga tcgtcgagat
241 gtctacttcg aagactggca agcacggcca cgccaaggtc catctggttg gtattgacat
301 ctttactggg aagaaatatg aagatatctg cccgtcaact cataatatgg atgtccccaa
361 catcaaaagg aatgacttcc agctgattgg catccaggat gggtacctat cactgctcca
421 ggacagcggg gaggtacgag aggaccttcg tctccctgag ggagaccttg gcaaggagat
481 tgagcagaag tacgactgtg gagaagagat cctgatcacg gtgctgtctg ccatgacaga
541 ggaggcagct gttgcaatca aggccatggc aaaataactg gctcccagga tggcggtggt
601 ggcagcagtg atcctctgaa cctgcagagg ccccctcccc gagcctggcc tggctctggc
661 ccggtcctaa gctggactcc tcctacacaa tttatttgac gttttatttt ggttttcccc
721 accccctcaa tctgtcgggg agcccctgcc cttcacctag ctcccttggc caggagcgag
781 cgaagctgtg gccttggtga agctgccctc ctcttctccc ctcacactac agccctggtg
841 ggggagaagg gggtgggtgc tgcttgtggt ttagtctttt tttttttttt tttttttttt
901 taaattcaat ctggaatcag aaagcggtgg attctggcaa atggtccttg tgccctcccc
961 actcatccct ggtctggtcc cctgttgccc atagcccttt accctgagca ccaccccaac
1021 agactgggga ccagccccct cgcctgcctg tgtctctccc caaacccctt tagatgggga
1081 gggaagagga ggagagggga ggggacctgc cccctcctca ggcatctggg agggccctgc
1141 ccccatgggc tttacccttc cctgcgggct ctctccccga cacatttgtt aaaatcaaac
1201 ctgaataaaa ctacaagttt aatatgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//