LOCUS BC030157 2099 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 5,
63kDa, mRNA (cDNA clone IMAGE:4561538), partial cds.
ACCESSION BC030157
VERSION BC030157.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2099)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2099)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC030157.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: d Column: 5.
FEATURES Location/Qualifiers
source 1..2099
/db_xref="H-InvDB:HIT000092067"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4561538"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2099
/gene="GTF3C5"
/gene_synonym="TFiiiC2-63"
/gene_synonym="TFIIIC63"
/gene_synonym="TFIIICepsilon"
/db_xref="GeneID:9328"
/db_xref="MIM:604890"
CDS <1..1555
/gene="GTF3C5"
/gene_synonym="TFiiiC2-63"
/gene_synonym="TFIIIC63"
/gene_synonym="TFIIICepsilon"
/codon_start=2
/product="GTF3C5 protein"
/protein_id="AAH30157.2"
/db_xref="GeneID:9328"
/db_xref="MIM:604890"
/translation="AEAADLGLGAAVPVELRRERRMVCVEYPGVVRDVAKMLPTLGGE
EGVSRIYADPTKRLELYFRPKDPYCHPVCANRFSTSSLLLRIRKRTRRQKGVLGTEAH
SEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGKHTSMYDKVLMLRPEKEAFFHQ
ELPLYIPPPIFSRLDAPVDYFYRPETQHREGYNNPPISGENLIGLSRARRPHNAIFVN
FEDEEVPKQPLEAAAQTWRRVCTNPVDRKVEEELRKLFDIRPIWSRNAVKANISVHPD
KLKVLLPFIAYYMITGPWRSLWIRFGYDPRKNPDAKIYQVLDFRIRCGMKHGYAPSDL
PVKAKRSTYNYSLPITVKKTSSQLVTMHDLKQGLGPSGTSGARKPASSKYKLKDSVYI
FREGALPPYRQMFYQLCDLNVEELQKIIHRNDGAENSCTERDGWCLPKTSDELRDTMS
LMIRQTIRSKRPALFSSSAKADGGKEQLTYESGEDEEDEEEEEEEEEDFKPSDGSENE
METEILDYV"
BASE COUNT 494 a 607 c 617 g 381 t
ORIGIN
1 ggcggaggcg gccgatttgg ggctgggggc cgccgtcccc gtggagctga ggcgggagcg
61 acgcatggtg tgcgtggagt acccgggagt ggtgcgtgat gtggctaaga tgctgccgac
121 tctgggcggc gaggaaggcg tctcccggat ctacgcagac cccaccaaga ggctggagct
181 gtacttccgg cccaaggacc catactgcca cccagtgtgc gccaaccgct tcagtaccag
241 cagcctgctg ctccgcatca ggaagagaac gaggcggcag aaaggggtgc tgggcactga
301 ggcccactcc gaggtcacat ttgacatgga gatccttggc atcatctcca ccatttacaa
361 atttcagggg atgtctgact tccagtactt ggctgtgcat acggaagcag gcggcaagca
421 tacgtcaatg tatgacaagg tgctcatgct ccggcccgag aaggaggcct ttttccacca
481 ggagctgccg ctctacatcc ccccacccat cttctcccgg ctggacgccc cggtggacta
541 cttctaccga ccagagaccc agcaccggga aggctacaac aatcccccca tctcaggtga
601 gaatctgatt ggcctgagca gagcccggcg cccccacaat gccatctttg tcaactttga
661 ggatgaggag gtgcccaagc agccactgga ggctgcagcc cagacgtgga ggagagtctg
721 cactaacccc gtggaccgga aggtggagga ggagctgagg aagctgtttg acatccgtcc
781 catctggtcc cgaaatgctg tcaaggccaa catcagcgtc cacccagaca agctcaaggt
841 cttgcttccc ttcatagcct attacatgat aacaggcccc tggcgcagcc tatggattcg
901 atttgggtat gacccccgaa aaaacccaga tgccaagatt tatcaagtcc tcgatttccg
961 aatccgttgt ggaatgaaac acggttacgc ccccagtgac ttgccggtca aagcaaagcg
1021 cagcacctac aactacagcc tccccatcac cgtcaagaag acatccagcc agcttgtcac
1081 catgcatgac ctgaagcagg gcctgggccc gtcggggacg agtggtgctc ggaaaccagc
1141 ttccagcaag tacaagctca aggactctgt ctacatcttc cgggaagggg ccttgccacc
1201 ctatcggcag atgttctacc agttatgcga cttgaatgtg gaagagttgc agaagatcat
1261 tcaccgcaat gacggggcag agaattcctg cacagaacgg gatgggtggt gcctccccaa
1321 gaccagcgac gagctcaggg acaccatgtc cctcatgatc cggcagacca tccgctccaa
1381 gaggcctgct ctcttttcca gctcagccaa ggctgatggc ggaaaagagc agctgacgta
1441 cgagtctggg gaagacgagg aggatgagga ggaggaggaa gaggaggagg aggacttcaa
1501 gccatccgac ggcagtgaaa acgaaatgga gacagagatt ctggactacg tgtgacaggg
1561 cccaaggctg ggcctccctg acccggccag actggtgtct ggcctaatga gggagccggg
1621 gctccccatt gccacccaca gtgcccggaa tggccctagg aggccctctg aggagagcta
1681 gagtcccagc aaagggtgca gctgacccta gcactggctg tgacatgctg cttggtgctg
1741 cctctggtcc tgaggggtta gggacatccc caaagggtat accctggctc tgccacccat
1801 gaaccagccc agcatccagc cagtgagtgg gcacccaatg cctctcagga tgagaccagt
1861 aaatgccgga ggtggagctg ggcagctgtg gagccccagg ccacaggcca gtctcgcttg
1921 gctctcatga ctgtggtggt ggagatagcg tggggagcct cgcccatggt ctcacgtggc
1981 aagaagtgcc tttagctctg gatcccaacc gtttggcaca gctttggcca cagccaggcc
2041 cctctggaat tgtccttatt aaaccagttt cccgagaaaa aaaaaaaaaa aaaaaaaaa
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