LOCUS BC030013 1914 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens HORMA domain containing 2, mRNA (cDNA clone MGC:26710
IMAGE:4823215), complete cds.
ACCESSION BC030013
VERSION BC030013.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1914)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749066.
FEATURES Location/Qualifiers
source 1..1914
/db_xref="H-InvDB:HIT000040930"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26710 IMAGE:4823215"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1914
/gene="HORMAD2"
/gene_synonym="MGC26710"
/db_xref="GeneID:150280"
/db_xref="HGNC:HGNC:28383"
CDS 71..994
/gene="HORMAD2"
/gene_synonym="MGC26710"
/codon_start=1
/product="HORMA domain containing 2"
/protein_id="AAH30013.1"
/db_xref="GeneID:150280"
/db_xref="HGNC:HGNC:28383"
/translation="MATAQLSHCITIHKASKETVFPSQITNEHESLKMVKKLFATSIS
CITYLRGLFPESSYGERHLDDLSLKILREDKKCPGSLHIIRWIQGCFDALEKRYLRMA
VLTLYTDPMGSEKVTEMYQFKFKYTKEGATMDFDSHSSSTSFESGTNNEDIKKASVLL
IRKLYILMQDLEPLPNNVVLTMKLHYYNAVTPHDYQPLGFKEGVNSHFLLFDKEPINV
QVGFVSTGFHSMKVKVMTEATKVIDLENNLFRENSTTEIAHQGLDCDEEEECNDHIQR
MNFVCSQQSSECSRKKRKVSEPVKVFIPNRK"
BASE COUNT 614 a 346 c 392 g 562 t
ORIGIN
1 agcggggtgg gagggaagcg tcgacgagct gaggttggac ttgttgaaat aatcctgata
61 cattcctaca atggccactg ctcagctttc tcactgcatc acaatacaca aggcttctaa
121 ggaaacagtt ttcccatccc aaatcactaa tgagcatgag tcattgaaaa tggtgaagaa
181 actttttgct acttccatct catgtataac atacctaagg ggcctgtttc cagagagctc
241 ttatggagaa cgccatttgg atgacctcag tttaaaaatc ctccgagaag ataaaaaatg
301 tcccgggtca ctgcatatta tcagatggat tcaaggttgt tttgatgctt tggaaaagag
361 atacctacgt atggcagtac tgacacttta cacagatccc atgggatctg agaaggtgac
421 tgagatgtac cagttcaaat tcaaatacac gaaagaagga gccactatgg attttgacag
481 tcatagcagc agtacaagct ttgaaagtgg aacaaacaat gaagatatta agaaagccag
541 tgttctactg atccgtaaat tgtatatact gatgcaggac cttgagccac ttcctaataa
601 tgttgtactt actatgaaac tccactacta taatgcagtg accccacatg attaccaacc
661 cctcggtttt aaagaagggg taaattcaca cttcctgctg tttgacaagg agcctatcaa
721 cgtgcaagtg ggatttgtct ccactggctt tcatagcatg aaagtaaaag tcatgacaga
781 ggctacaaaa gtgattgatt tggagaacaa tctgtttcgg gagaacagca ctactgagat
841 cgcccatcag ggtctagact gtgatgagga agaagaatgc aatgaccata ttcaaagaat
901 gaattttgtg tgcagtcagc aaagttctga gtgctccagg aagaagagga aggtcagtga
961 accagtgaag gtcttcatcc ctaacagaaa atgaaagcta aatattcctt ctacatttat
1021 tttaaaataa gtttattttg taaaaacatg cataaactgt cttagcagga aagtacattc
1081 ctgttaccaa aacctttttc taaatttttt gctcaatttt ttttgtcagt tgctaagtgc
1141 taaattactg gccaggtagg acgcgagtcc actttgccat aaggaaagcg ggtcaatagg
1201 gctgcctctg gatagcatta cttcaaagct gggttagaga tgaggcacct tttatattat
1261 atttgtaaaa gaaccacagc agctattttg gaaagaagct gttgttctca aaggaaagaa
1321 ggattttttt gcataattaa actcttcagc tatttagact actgtgaaat gttttgactt
1381 gttgtaacct gtatactgga atccctctct agctgtatta aaaattccca cagagttgca
1441 taggatgtgt ggaggtgctt atccaggtgt gatttatgtg ttaacctcag tcacgaggtt
1501 gatcagctaa ttgtgggacc aaaatgtgcc ctgcctcaac tctggcccca ggccctgttc
1561 tgttatccaa tccgaaacac ggaacatgct gcaattcagg agtctggctc tcttcttaag
1621 acctatatta aatatttccc aagaagcact tcagtttatc agtctgtaac ctgcaaatga
1681 tgctattagt tccctcctta ttctggaaga atttggatag acttaattga tgattagtat
1741 gagatgaaca atagatgact taaagtgtta tttctattat ttatataaca tgagatttag
1801 taacttataa aatgaggttt agtaatttaa tttaaatgga taggaccaat aagttaaata
1861 ttaagtgtgt gacttatggt taaataaaat gaaaatacaa aaaaaaaaaa aaaa
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