LOCUS BC029922 953 bp mRNA linear HUM 02-MAR-2004
DEFINITION Homo sapiens CXXC finger 1 (PHD domain), mRNA (cDNA clone
IMAGE:5114064), partial cds.
ACCESSION BC029922
VERSION BC029922.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 953)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: g Column: 21.
FEATURES Location/Qualifiers
source 1..953
/db_xref="H-InvDB:HIT000091945"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5114064"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..953
/gene="CXXC1"
/gene_synonym="CGBP"
/gene_synonym="hCGBP"
/gene_synonym="HsT2645"
/gene_synonym="PCCX1"
/gene_synonym="PHF18"
/db_xref="GeneID:30827"
CDS <1..691
/gene="CXXC1"
/gene_synonym="CGBP"
/gene_synonym="hCGBP"
/gene_synonym="HsT2645"
/gene_synonym="PCCX1"
/gene_synonym="PHF18"
/codon_start=2
/product="CXXC1 protein"
/protein_id="AAH29922.1"
/db_xref="GeneID:30827"
/translation="KLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEE
SNEGDSDDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRL
FCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQC
NRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDP
LTTDLRSSADR"
BASE COUNT 199 a 292 c 264 g 198 t
ORIGIN
1 gaagctgctc gaacgcattc gccgagagca gcagagtgcc cgcacccgcc ttcaggaaat
61 ggaacgccga ttccatgagc ttgaggccat cattctacgt gccaagcagc aggctgtgcg
121 cgaggatgag gagagcaacg agggtgacag tgatgacaca gacctgcaga tcttctgtgt
181 ttcctgtggg caccccatca acccacgtgt tgccttgcgc cacatggagc gctgctacgc
241 caagtatgag agccagacgt cctttgggtc catgtacccc acacgcattg aaggggccac
301 acgactcttc tgtgatgtgt ataatcctca gagcaaaaca tactgtaagc ggctccaggt
361 gctgtgcccc gagcactcac gggaccccaa agtgccagct gacgaggtat gcgggtgccc
421 ccttgtacgt gatgtctttg agctcacggg tgacttctgc cgcctgccca agcgccagtg
481 caatcgccat tactgctggg agaagctgcg gcgtgcggaa gtggacttgg agcgcgtgcg
541 tgtgtggtac aagctggacg agctgtttga gcaggagcgc aatgtgcgca cagccatgac
601 aaaccgcgcg ggattgctgg ccctgatgct gcaccagacg atccagcacg atcccctcac
661 taccgacctg cgctccagtg ccgaccgctg agcctcctgg cccggacccc ttacaccctg
721 cattccagat gggggagccg cccggtgccc gtgtgtccgt tcctccactc atctgtttct
781 ccggttctcc ctgtgcccat ccaccggttg accgcccatc tgcctttatc agagggactg
841 tccccgtcga catgttcagt gcctggtggg gctgcggagt ccactcatcc ttgcctcctc
901 tccctgggtt ttgttaataa aattttgaag aaaccaagaa aaaaaaaaaa aaa
//