LOCUS BC029858 1632 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 23, mRNA (cDNA clone
MGC:34414 IMAGE:5170643), complete cds.
ACCESSION BC029858
VERSION BC029858.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1632)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1632)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42542401.
FEATURES Location/Qualifiers
source 1..1632
/db_xref="H-InvDB:HIT000040899"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34414 IMAGE:5170643"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1632
/gene="LRRC23"
/gene_synonym="B7"
/gene_synonym="B7 isoform"
/gene_synonym="LRPB7"
/db_xref="GeneID:10233"
/db_xref="HGNC:HGNC:19138"
CDS 194..1225
/gene="LRRC23"
/gene_synonym="B7"
/gene_synonym="B7 isoform"
/gene_synonym="LRPB7"
/codon_start=1
/product="leucine rich repeat containing 23"
/protein_id="AAH29858.1"
/db_xref="GeneID:10233"
/db_xref="HGNC:HGNC:19138"
/translation="MSDEDDLEDSEPDQDDSEKEEDEKETEEGEDYRKEGEEFPEEWL
PTPLTEDMMKEGLSLLCKTGNGLAHAYVKLEVKERDLTDIYLLRSYIHLRYVDISENH
LTDLSPLNYLTHLLWLKADGNLLRSAQMNELPYLQIASFAYNQITDTEGISHPRLETL
NLKGNSIHMVTGLDPEKLISLHTVELRGNQLESTLGINLPKLKNLYLAQNMLKKVEGL
EDLSNLTTLHLRDNQIDTLSGFSREMKSLQYLNLRGNMVANLGELAKLRDLPKLRALV
LLDNPCTDETSYRQEALVQMPYLERLDKEFYEEEERAEADVIRQRLKEEKEQEPEPQR
DLEPEQSLI"
BASE COUNT 451 a 407 c 469 g 305 t
ORIGIN
1 ccagcacgta ggtcttcgaa ttcccgggat caattagcgg cccaacgccc cttccgcgcc
61 tcatccgggt tcccgggacg ggaaagtggc gtggtaacca ggcaactact gatcaatccc
121 ctccccggct gatttgcgca tcaggaggag gactgagctt acctgactcc agagctttca
181 ggagggaaga aagatgtcag atgaagatga tctagaagac tctgagccag accaggatga
241 ttctgagaaa gaagaggacg agaaggagac agaggagggg gaggactaca gaaaagaggg
301 ggaagagttc cctgaggaat ggctgcccac ccccctcacg gaggacatga tgaaggaagg
361 gctttctctg ctctgtaaga caggcaatgg gctggctcat gcttatgtca agctggaggt
421 taaagagagg gacctgacag acatctactt gctgcgctcc tacatccatc tgcgctatgt
481 ggatatttct gagaaccacc tgacagacct gtctccactc aactacctca cccacctgct
541 ctggctcaag gctgatggca atctgctgcg aagtgcccag atgaatgaac tgccctacct
601 gcagattgct agttttgctt ataaccagat tactgacact gaaggcatct ctcatcctcg
661 tcttgaaacc ctgaatctca aagggaacag catccacatg gtgacaggtc tggaccccga
721 gaagttgatc agcctgcaca cagtggagct tcgggggaac cagctggaaa gcaccctggg
781 aatcaatctt cctaagctga agaacctcta cctggcccaa aacatgctga agaaggtgga
841 aggcttggag gatctgagca atctcaccac cttgcatctt cgagacaacc agattgacac
901 cctgagtggc ttctccagag aaatgaaatc attgcagtac ctcaacctga ggggcaacat
961 ggtggccaac ctgggggagc tggccaagct tcgagacctg cccaagctgc gagcgttggt
1021 gctgcttgat aacccatgca cggacgaaac cagctaccgc caggaggccc tggtgcagat
1081 gccatacctt gaacgcctgg acaaggaatt ctatgaggag gaggaacggg ctgaggctga
1141 tgtgattcga cagaggctga aggaagaaaa ggagcaggag cctgagcccc agcgtgacct
1201 ggaacccgaa cagtcattga tctagcagca gttctagcct ctaaagatag agatcaaaga
1261 cgctggcctt cagacctgat cagactccca ggggcagcca ccacatgtat gacagagaac
1321 agaggatgcc tgtttttgcc ccaaagctgg aaattcatca caacctgagg cccaggatct
1381 gctctgtgcc ggtcctctgg gcagtgtggg gtgcagaatg gggtgcctag gcctgagcgt
1441 tgcctggagc ctaggccggg ggccgccctc gggcaggcgt gggtgagagc caagaccgcg
1501 tgggccgcgg ggtgctggta ggagtggttg gagagacttg cgaaggcggc tggggtgttc
1561 ggatttccaa taaagaaaca gagtgatgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aa
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