LOCUS BC029806 564 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens keratinocyte associated protein 2, mRNA (cDNA clone
MGC:35430 IMAGE:5189880), complete cds.
ACCESSION BC029806
VERSION BC029806.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 564)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 564)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: j Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..564
/db_xref="H-InvDB:HIT000040882"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35430 IMAGE:5189880"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..564
/gene="KRTCAP2"
/gene_synonym="KCP2"
/db_xref="GeneID:200185"
/db_xref="HGNC:HGNC:28942"
CDS 14..502
/gene="KRTCAP2"
/gene_synonym="KCP2"
/codon_start=1
/product="keratinocyte associated protein 2"
/protein_id="AAH29806.1"
/db_xref="GeneID:200185"
/db_xref="HGNC:HGNC:28942"
/translation="MRIANRTRFSSPFLARGAGWTHGRGMMVVGTGTSLALSSLLSLL
LFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEIL
LCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKK
RN"
BASE COUNT 129 a 166 c 131 g 138 t
ORIGIN
1 taagcgctga cgcatgcgca tagctaaccg cacccggttc agctcgcctt tcttggccag
61 aggcgccggt tggactcacg ggcggggcat gatggtggtg ggtacgggca cctcgctggc
121 gctctcctcc ctcctgtccc tgctgctctt tgctgggatg cagatgtaca gccgtcagct
181 ggcctccacc gagtggctca ccatccaggg cggcctgctt ggttcgggtc tcttcgtgtt
241 ctcgctcact gccttcaata atctggagaa tcttgtcttt ggcaaaggat tccaagcaaa
301 gatcttccct gagattctcc tgtgcctcct gttggctctc tttgcatctg gcctcatcca
361 ccgagtctgt gtcaccacct gcttcatctt ctccatggtt ggtctgtact acatcaacaa
421 gatctcctcc accctgtacc aggcagcagc tccagtcctc acaccagcca aggtcacagg
481 caagagcaag aagagaaact gaccctgaat gttcaataaa gttgattctt tgtaaaaaaa
541 aaaaaaaaaa aaaaaaaaaa aaaa
//