LOCUS BC029783 1519 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens signal transducer and activator of transcription 3
(acute-phase response factor), mRNA (cDNA clone IMAGE:5193339),
with apparent retained intron.
ACCESSION BC029783
VERSION BC029783.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1519)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1519)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47458819
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1519
/db_xref="H-InvDB:HIT000091899"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5193339"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 361 a 353 c 443 g 362 t
ORIGIN
1 cccaaccgga tcctggacag gcaccccggc ttggcgctgt ctctccccct cggctcggag
61 aggcccttcg gcctgaggga gcctcgccgc ccgtccccgg cacacgcgca gccccggcct
121 ctcggcctct gccggagaaa caggtgaagg gggtgcaggg tggggccgtt ggggaggcct
181 ggggacccgg gggctccgca gcggcagggg gcctctggga ccttggggat gttgtgatgg
241 acgctgcagt ggggccggga gagatgaaga gacgcggagg gtcgccctga gggaagactc
301 ttcgggatga caggagcggg cctcggaagg gactcggggc gctggaggga agtttcgttc
361 ttcggagaaa cagaacgcgc tcgagggggc accgtggggc gagggcgcac tcggttgcgg
421 cggcaggagt gagggacagt cccccgattt cctgctccct ggggccctgg ggacgttccg
481 gccaccggag cgactgtcac gccgacgggg atcaccggcg cgagtggggg gtcggaaagc
541 gcctcctccc cgcccggtcg gcggctcccg ctgagccact tcctccgctt gccctgttcc
601 cgctccttca ggagacagct gtgccctttt ggaggcagga ataggtgtgt ctgtcgcctg
661 cagccttacg ggctggctgg tcgtgggtag gctttattgc ataagaatca agtttcctgt
721 agggaaattg acagaccggt actctttcta aattccctcg catctttttc taggttaaat
781 tatgctcccc ccacgtcccc gccttgtaaa aaagagaaaa aaagacaaaa taaaatcccc
841 atcaacccgt caagccagct ctagagagag aaataaacct cttgacattg tccttttcca
901 aatacctggt aaagtcggcc agaagataaa taattgagcc attgcattta ctggattgtg
961 gtgttgctta attgcatagg acggaatgaa ccaattgaga gtgggagttt tctgtctcag
1021 agccaagatc ttgggtaaat gcagaggaga gggaaacaaa gacaggctgg ccttgaaaaa
1081 accatgtgtg caaactttac atgcatttgg ggggtgtggt tgcactgaag ttaacaagat
1141 tcaaaccgtc gcccaagttg gtatttccat gtttggtaca catcactctg tgccatatca
1201 ggtcgttgtt aagtgtggtg acaaaatcag tggttagtca tttttttaat taaaaatgtg
1261 tatagtgtgt acctgctggt cttactgtat gtgcaactaa aggtttacat agtctgtgta
1321 tgggttgtaa atttttggct ggctgtgctg ataaagcatt gggcttgaat aaagcaaagc
1381 agaaaatcat ctcaatcttt tatatgtgga tttagactgt gttatgactt ggttcagcca
1441 gttttctatc ttattttata ttaaatatgt ctgtgttctc tgaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaa
//