LOCUS BC029687 3664 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae), mRNA (cDNA clone MGC:29835 IMAGE:5001181), complete
cds.
ACCESSION BC029687
VERSION BC029687.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3664)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3664)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: l Column: 8.
FEATURES Location/Qualifiers
source 1..3664
/db_xref="H-InvDB:HIT000040859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29835 IMAGE:5001181"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3664
/gene="DCLRE1B"
/gene_synonym="FLJ12810"
/gene_synonym="FLJ13998"
/gene_synonym="SNM1B"
/db_xref="GeneID:64858"
/db_xref="HGNC:HGNC:17641"
/db_xref="MIM:609683"
CDS 172..1770
/gene="DCLRE1B"
/gene_synonym="FLJ12810"
/gene_synonym="FLJ13998"
/gene_synonym="SNM1B"
/codon_start=1
/product="DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae)"
/protein_id="AAH29687.1"
/db_xref="GeneID:64858"
/db_xref="HGNC:HGNC:17641"
/db_xref="MIM:609683"
/translation="MNGVLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTW
ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPG
SVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQE
AAHQIVQLIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLAD
VFTVEEKAGRIHAVDHMEICHSNMLRWNQTHPTIAILPTSRKIHSSHPDIHVIPYSDH
SSYSELRAFVAALKPCQVVPIVSRRPCGGFQDSLSPRISVPLIPDSVQQYMSSSSRKP
SLLWLLERRLKRPRTQGVVFESPEESADQSQADRDSKKAKKEKLSPWPADLEKQPSHH
PLRIKKQLFPDLYSKEWNKAVPFCESQKRVTMLTAPLGFSVHLRSTDEEFISQKTREE
IGLGSPLVPMGDDDGGPEATGNQSAWMGHGSPLSHSSKGTPLLATEFRGLALKYLLTP
VNFFQAGYSSRRFDQQVEKYHKPC"
BASE COUNT 953 a 873 c 825 g 1013 t
ORIGIN
1 cctttttctg cccactctgg taacttattg ctctgctggg ctctttccct tagggtctct
61 ggccctgttc ttgccccagc atgactttta tcgggacgcc gttgtggaag cctcacgcag
121 gagccctgcc cccgtggaga agatcccact ggtgactcca accctaccac catgaatggg
181 gtcctgatcc cccatacgcc catcgcagtg gacttctgga gcctgcgccg ggctggcacc
241 gcacgtctct tcttcttgtc tcacatgcac tcggaccaca ccgtgggcct gtctagcacc
301 tgggcccggc ccctctactg ctccccaatt acagcccacc tcttgcatcg tcacctacag
361 gtatctaagc aatggatcca agccctggag gttggtgaga gccatgtatt acccctagat
421 gaaattggac aagagaccat gaccgtaacc ctcctcgatg ccaatcactg tcctggttct
481 gtcatgtttc tctttgaagg atattttgga accatcctct acacaggtga ttttcgatac
541 acaccatcca tgctaaagga gccagccctg acactgggga aacagatcca tactttatac
601 ctagacaaca ccaattgcaa tccagccctg gttcttcctt cccgacaaga agctgcccac
661 cagattgtcc agctcattcg aaaacaccca caacataaca taaagattgg actctacagc
721 ctgggaaagg aatcactgct ggagcagctg gccctggagt ttcagacctg ggtggtattg
781 agtcctcggc gcctggagtt ggtacagcta ctgggcctgg cagatgtgtt cacagtggag
841 gagaaggctg gccgcatcca tgcagtagac catatggaga tctgccattc caacatgctg
901 cgttggaacc agacccaccc tacgattgct atccttccca caagccgaaa aatccacagc
961 tcccaccctg atatccacgt catcccttac tctgaccatt cctcttactc cgagcttcgt
1021 gcctttgtcg cagcactgaa gccttgccag gtggtgccca ttgtaagtcg gcggccctgt
1081 ggaggctttc aggacagtct gagccccagg atctccgtgc ccctgattcc ggactctgta
1141 cagcaataca tgagttcttc ctctagaaaa ccaagccttc tctggctgtt agaaaggagg
1201 ctaaagaggc cgagaaccca aggtgttgtg tttgaatccc ctgaggaaag tgctgatcaa
1261 tctcaagctg acagagactc aaagaaggcc aagaaagaga aactttctcc ctggcctgcg
1321 gaccttgaaa agcagccttc ccaccatcct ttgcggatca agaagcagtt gttcccagat
1381 ctctatagca aagaatggaa caaggcagtg cctttctgtg agtctcaaaa gagggtgact
1441 atgttgacgg ccccactggg attttcagtg cacttaaggt ctacagatga ggagtttatt
1501 tctcaaaaaa ccagggagga aattggttta gggtccccct tggtacccat gggagatgat
1561 gatggaggtc cagaagccac agggaatcag agtgcctgga tgggccatgg ttctcccctg
1621 tcccacagca gcaagggcac ccctcttcta gctactgaat tcaggggtct agcactcaaa
1681 tatcttctga ctccagtgaa ctttttccag gcagggtatt cttccaggag atttgaccag
1741 caagtggaaa aataccataa accctgctga agacaggaga gtacagaatg acaacattga
1801 gcccacactg cagttttgaa gatagtaact gatggctggt gggaaagagt ttgtttttgg
1861 ggcctacttt tctatcttta caagactctt atgggcccac cgtggagcag cacttcccaa
1921 aacttgttca ctggggtcct cgtgcctatg gaatccttct ttttataact aagtttaaga
1981 aatacttttt ttataaaatc tttggagtat gcgtgagcaa attaaaagtt ctttgaagtc
2041 ctacagtaac ttaatctgtt taaccttgtt taacccagta tttctcaaac ttttgtgaac
2101 atgcaatcat cttatgtggg tacagaaaga ggtaaagagt ctgaatcaaa aaggaccagg
2161 ttattgctgt tgctgttttg tggtgtcatg agccattctc catgtcccct tctccctctt
2221 ctcagatcaa aatccctagg gagttctatt tttaaaatta tgaactatgg cgctgcatgc
2281 ttcaatcctg aacgtcactg acttgctgtg accatccaaa taattttcct gtctctgcct
2341 ctgggaggga acaggaagcg atgaagaggt cttggaacag tagtgaaaat tctacctcta
2401 tgtccttcat gaggatgtgc agtatcccag tatcactggg atccatgtgg aacagagcca
2461 gctggggggt tgggcagctc tctccaaggc agtacctaga gcccagctga acaacaaggc
2521 tttgggtgtg aagggactcc ccagcctgga gaccctattt ggctgaaaca gttacaaaat
2581 atcaaatgtg ttgtcagata ttcctccaat tgttcacata gctgggatat ttgttgctcc
2641 cctcacccct tggattatgt agggagccag tgcacacagc ctgtttgttt tagtatccaa
2701 ggaagagacc aaggagccag ctggcgggaa ggggtggggg tgtgcagtct gccctgtcct
2761 tctgctcata acctgacaaa atgccaaact agtaagcagg atagctgata ccacggctat
2821 gagggagtag gctctgagag ggcacagact tgtggagctg ggcgtctgga tcaaaactgc
2881 tttgggatgg aacctcgagc cctagcagtg aagaagattc catttcttgt ccaggggatt
2941 taaaagagtt ttctgctttg agagagaaat agagagttta gaaagcaatt gctcttggga
3001 aagctataca cagctctgtt ttgtcaatga cctttgttgt aagtctccca acgtcctatt
3061 aggagccaca gcaggtgagg catttggtgc agcaggaaac atggggactg cctaggctcg
3121 aatctgtggc accctgagca attacttaaa ttgtggagcc tagttcctca tctgtaagat
3181 ggacttgaga ttcctacctc tcatgattac tatggagatt gaataattgg taaaattctc
3241 ctagctcagt gactgccaca ggatgggtct ttcagatttt ggttctcttt agcttctggt
3301 tcttgaaaga aattaatctg tatataacat aagaaacttt gaaagtcaaa aaaacaaaaa
3361 attttaattc ctcgtagatt aattgatttg ctatctttta gttttttttt ctatgcatgt
3421 agatgtatta aatatgtaaa tgtttttcaa agttgaggta atattgtata gaattttata
3481 gcctacattt taatttcttg atatcttaag catttcactt attagatatt gttcaaaaat
3541 gccattttta atatttgtat aataccctat catgtgagta taccttaact aagccattcc
3601 catattcaac attttgtgta ctgtttttct aattacatat attacaatga aaaaaaaaaa
3661 aaaa
//