LOCUS BC029652 1443 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens allantoicase, mRNA (cDNA clone MGC:34251
IMAGE:5164086), complete cds.
ACCESSION BC029652
VERSION BC029652.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1443)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1443)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: j Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548426.
FEATURES Location/Qualifiers
source 1..1443
/db_xref="H-InvDB:HIT000040852"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34251 IMAGE:5164086"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1443
/gene="ALLC"
/gene_synonym="ALC"
/db_xref="GeneID:55821"
/db_xref="HGNC:HGNC:17377"
CDS 81..1310
/gene="ALLC"
/gene_synonym="ALC"
/codon_start=1
/product="allantoicase"
/protein_id="AAH29652.1"
/db_xref="GeneID:55821"
/db_xref="HGNC:HGNC:17377"
/translation="MADAPKEGRLTRFLDFTQLMDMASESVGGKILFATDDFFAPAEN
LIKSDSPCFKEHEYTEFGKWMDGWETRRKRIPGHDWCVLRLGIQGVIRGFDVDVSYFT
GDYAPRVSIQAANLEEDKLPEIPERGIRTGAAATPEEFEAIAELKSDDWSYLVPMTEL
KPGNPASGHNYFLVNSQQRWTHIRLNIFPDGGIARLRVFGTGQKDWTATDPKEPADLV
AIAFGGVCVGFSNAKFGHPNNIIGVGGAKSMADGWETARRLDRPPILENDENGILLVP
GCEWAVFRLAHPGVITRIEIDTKYFEGNAPDSCKVDGCILTTQEEAVIRQKWILPAHK
WKPLLPVTKLSPNQSHLFDSLTLELQDVITHARLTIVPDGGVSRLRLRGFPSSICLLR
PREKPMLKFSVSFKANP"
BASE COUNT 409 a 335 c 368 g 331 t
ORIGIN
1 caagcaccgt gggaccttgg ctggcttctg gggagcaaga gatccattta tgaatacttg
61 atttctgact gctgggaagc atggctgatg ctccgaagga gggaagactg acccggtttc
121 tggacttcac ccagctgatg gacatggcat ctgaatccgt aggaggaaaa attttatttg
181 caacagatga cttttttgct cctgcagaaa acctcataaa gagtgacagc ccgtgcttca
241 aagagcatga atatacggag tttgggaaat ggatggatgg ctgggagacc aggaggaaaa
301 ggattccagg tcacgactgg tgtgtcctca ggctggggat ccaaggagtc atccggggct
361 tcgacgtgga cgtttcttac ttcacgggag attacgctcc tcgagtgtcc attcaagcag
421 caaacttgga agaagataaa ctaccagaaa tcccagaaag aggaatcagg acaggagctg
481 cagccactcc tgaggagttt gaagccattg ctgagctaaa atccgacgac tggagttact
541 tggttcccat gactgagctt aagccaggaa accctgcttc cggccacaac tattttcttg
601 tcaattccca gcagagatgg actcatatca gactcaacat tttcccagat ggtggaattg
661 cacgacttag agtattcggt actggacaaa aagactggac tgcaactgac cccaaagaac
721 ctgcagacct agtggccatc gcttttgggg gtgtctgtgt aggatttagt aatgctaagt
781 ttgggcaccc aaacaatata ataggagttg gcggggcaaa gtctatggcg gatggttggg
841 aaactgcaag aaggctggac cggccaccaa tattagaaaa tgatgagaat ggcattctct
901 tggttccggg ttgtgaatgg gcagttttcc gattggcaca tcctggagta ataactcgaa
961 ttgaaattga cacaaaatat tttgaaggca atgctcctga cagctgtaaa gtggatgggt
1021 gcatcctgac aactcaggaa gaagccgtga tcaggcaaaa gtggattctc ccggcccaca
1081 agtggaaacc actgcttcca gtgaccaagt tgtctcccaa ccaaagtcat ctgttcgata
1141 gcctgaccct agagctccaa gatgtcatca ctcacgccag gctcaccatc gtccccgacg
1201 ggggagtgag ccgccttcgg ctccggggct tccccagctc catctgcctc ctgaggcccc
1261 gggagaagcc catgttgaag ttctcggtga gcttcaaagc aaacccttaa cacacacaaa
1321 gccccggtgt cggacacaca gcagtaattt cccagtcata gtcttctttt caaatgtttt
1381 gaacacctgg tgatttaata aagtggtcgt ctcacaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaa
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