LOCUS BC029619 1313 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens activating transcription factor 1, mRNA (cDNA clone
MGC:32666 IMAGE:4102231), complete cds.
ACCESSION BC029619
VERSION BC029619.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1313)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: b Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38261963.
FEATURES Location/Qualifiers
source 1..1313
/db_xref="H-InvDB:HIT000040849"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32666 IMAGE:4102231"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1313
/gene="ATF1"
/gene_synonym="TREB36"
/db_xref="GeneID:466"
/db_xref="HGNC:HGNC:783"
/db_xref="MIM:123803"
CDS 23..838
/gene="ATF1"
/gene_synonym="TREB36"
/codon_start=1
/product="activating transcription factor 1"
/protein_id="AAH29619.1"
/db_xref="GeneID:466"
/db_xref="HGNC:HGNC:783"
/db_xref="MIM:123803"
/translation="MEDSHKSTTSETAPQPGSAVQGAHISHIAQQVSSLSESEESQDS
SDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENSGVSAAVTSMSVPTPIY
QTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQI
LVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREI
RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKSV"
BASE COUNT 469 a 253 c 257 g 334 t
ORIGIN
1 gaggcggcag ccacagttga ttatggaaga ttcccacaag agtaccacgt cagagacagc
61 acctcaacct ggttcagcag ttcagggagc tcacatttct catattgctc aacaggtatc
121 atctttatca gaaagtgagg agtcccagga ctcatccgac agcataggct cctcacagaa
181 agcccacggg atcctagcac ggcgcccatc ttacagaaaa attttgaaag acttatcttc
241 tgaagataca cggggcagaa aaggagacgg agaaaattct ggagtttctg ctgctgtcac
301 ttctatgtct gttccaactc ccatctatca gactagcagc ggacagtata ttgccattgc
361 cccaaatgga gccttacagt tggcaagtcc aggcacagat ggagtacagg gacttcagac
421 attaaccatg acaaattcag gcagtactca gcaaggtaca actattcttc agtatgcaca
481 gacctctgat ggacagcaga tacttgtgcc cagcaatcag gtggtcgtac aaactgcatc
541 aggagatatg caaacatatc agatccgaac tacaccttca gctacttctc tgccacaaac
601 tgtggtgatg acatctcctg tgactctcac ctctcagaca actaagacag atgaccccca
661 attgaaaaga gaaataaggt taatgaaaaa cagagaagct gctcgagaat gtcgcagaaa
721 gaagaaagaa tatgtgaaat gcctggaaaa ccgagttgca gtcctggaaa atcaaaataa
781 aactctaata gaagagttaa aaactttgaa ggatctttat tccaataaaa gtgtttgatt
841 cctaagaaag aaaatatttt tgtggacatg cataaaaatt aaatggattt cctagtggag
901 ttttataaat taaaaggtca aaactgaagc tttttattta ggcttttcca aatcaaggat
961 aaatatctta cgcacgatat ctagtgacag aggagaaagt ggaaaatgac ctcaaggaag
1021 ctacgggcac aactggaagc cttgtagaaa ttaaacatat tcaaggagca agaaatgaac
1081 tttcagcagt ctaaattttc taaataacca atagttgcca atctaaagtg gcagagaaga
1141 tgaaatttga taaactgaat tttttttaaa aatccattta ccctacaggt ttgcatttgt
1201 ttgctgaaat ttaccttttt ttagttatat atatgtgtgt gtgtgtgtgt aatttctgcc
1261 aataaattct aaattacaaa gataaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//