LOCUS BC029495 1950 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens ubiquitin specific peptidase 6 (Tre-2 oncogene), mRNA
(cDNA clone IMAGE:5272318), with apparent retained intron.
ACCESSION BC029495
VERSION BC029495.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1950)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1950)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758563
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1950
/db_xref="H-InvDB:HIT000040780"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5272318"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 518 a 499 c 585 g 348 t
ORIGIN
1 gagttctacg gcagttacac acacgcagtg gtattcacaa gcggttttgt ggactcaaag
61 gttttctccc tgagaggcat aacccaggcc agctgattca tcagaatcag gaaactgggc
121 atctctgtgg ccctgaacat cccaggaggc cgatcgtaca gagacctctg gtgcctgacc
181 gcagttcaca tccacatccc tggaatagac catcacaggc tcttcaccct tggcaggtgg
241 acaccattca acctgccggg gcaggatgga catggtagag aatgcagata gtttgcaggc
301 acaggagcgg aaggacatac ttatgaagta tgacaaggga caccgagctg ggctgccaga
361 ggacaagggg cctgagcccg ttggaatcaa cagcagcatt gatcgttttg gcattttgca
421 gtcctgcccc tcctgggagt cagagccaca ggaaggccct tgtcctccct tccctgtgcc
481 ttctcccggg ctgagccctg agctggatag ggacagagcc agtcctttct gggggtcggc
541 tcccaggctt gggcggctcc aggccctgtg cacgtcctca gctctgcctg ggttgcctta
601 cagtgagacg gagctgcctc ctgtgactgc acgggaggcg aagaaaattc ggcgggagat
661 gacacgaacg agcaagtgga tggaaatgct gggagaatgg gagacatata agcacagtag
721 caaactcata gatcgagtgt acaagggaat tcccatgaac atccggggcc cggtgtggtc
781 agtcctcctg aacattcagg aaatcaagtt gaaaaacccc ggaagatacc agatcatgaa
841 ggagaggggc aagaggtcat ctgaacacat ccaccacatc gacctggacg tgaggacgac
901 tctccggaac catgtcttct ttagggatcg atatggagcc aagtaagcct acgggagcca
961 cacagtccca gcagagatgg ggtgaacgag agggatgggg acttccccgg agcagaagcc
1021 agggtcaccc aggagggatg acagagctgc caagagctct cctggcccag ggagcagccg
1081 gcaccatgaa ccgagcacct ccctggttcc aagccctggg ccaggctgga acatgtgggg
1141 ccagaaccca ggaggatcct gaggagacag aaaacagcaa agaaaatcac acgcaatggt
1201 gaaaggtgct ctccctgacc cacggagacc catggtagga cccacaggag ggtggcagga
1261 tggagggccc atgagcctcc ccaggcaaca cagcaccaaa tgctgggaga attaggggtc
1321 ctggaaactg tcatccaggt ctgctgggaa catgacatgg cacagccaca ttggcagcca
1381 gttgggcagt ggctcacaaa gctcagtgga cttgaaccac acatccccat ggtgtcacag
1441 atattgaacc cactgatttg aaaactgaca tccacatgaa acctgcatgc caggttcact
1501 gcttgattcc tcatcactca cacatggagc cttcggggat ggccttcaac acgggaatgg
1561 ggagagacag gctggtcctc ccttcaaacg gaagacccag tgagaaaagg gaacgagcca
1621 gtgatgcctg cacgaacgtg ggtggatcct agatgcattt tgctaaggga aagaagccag
1681 acccaataag ctaccatagt aggattccca ttcctaggcc attctggaaa aggccaaacc
1741 atagggactg agcagcagtc tgggtggcca ggggctgacg gatcggggag aggctgggtg
1801 cataggggaa accctggaga tttggaagat gatggagtcg ctccaggagg ggctggagcg
1861 gtggccggga gactgcacat tggtttggaa ccatggagga actgtgcacc caaagactga
1921 actggtgtgt gtgcaaaaaa aaaaaaaaaa
//