LOCUS BC029405 785 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens H3 histone, family 3A, mRNA (cDNA clone MGC:32638
IMAGE:4077662), complete cds.
ACCESSION BC029405
VERSION BC029405.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 785)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 785)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52630340.
FEATURES Location/Qualifiers
source 1..785
/db_xref="H-InvDB:HIT000040748"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32638 IMAGE:4077662"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..785
/gene="H3F3A"
/gene_synonym="H3.3A"
/db_xref="GeneID:3020"
/db_xref="HGNC:HGNC:4764"
/db_xref="MIM:601128"
CDS 111..521
/gene="H3F3A"
/gene_synonym="H3.3A"
/codon_start=1
/product="H3 histone, family 3A"
/protein_id="AAH29405.1"
/db_xref="GeneID:3020"
/db_xref="HGNC:HGNC:4764"
/db_xref="MIM:601128"
/translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP
GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
BASE COUNT 235 a 179 c 186 g 185 t
ORIGIN
1 gtgttcgcag ccgccgccgc gccgccgtcg ctctccaacg ccagcgccgc ctctcgctcg
61 ccgagctcca gccgaaggag aaggggggta agtaaggagg tctctgtacc atggctcgta
121 caaagcagac tgcccgcaaa tcgaccggtg gtaaagcacc caggaagcaa ctggctacaa
181 aagccgctcg caagagtgcg ccctctactg gaggggtgaa gaaacctcat cgttacaggc
241 ctggtactgt ggcgctccgt gaaattagac gttatcagaa gtccactgaa cttctgattc
301 gcaaacttcc cttccagcgt ctggtgcgag aaattgctca ggactttaaa acagatctgc
361 gcttccagag cgcagctatc ggtgctttgc aggaggcaag tgaggcctat ctggttggcc
421 tttttgaaga caccaacctg tgtgctatcc atgccaaacg tgtaacaatt atgccaaaag
481 acatccagct agcacgccgc atacgtggag aacgtgctta agaatccact atgatgggaa
541 acatttcatt ctcaaaaaaa aaaaaaaaaa tttctcttct tcctgttatt ggtagttctg
601 aacgttagat attttttttc catggggtca aaaggtacct aagtatatga ttgcgagtgg
661 aaaaataggg gacagaaatc aggtattggc agtttttcca ttttcatttg tgtgtgaatt
721 tttaatataa atgcggagac gtaaagcatt aatgcaaaaa aaaaaaaaaa aaaaaaaaaa
781 aaaaa
//