LOCUS BC029382 1269 bp mRNA linear HUM 20-DEC-2004
DEFINITION Homo sapiens angiogenic factor with G patch and FHA domains 1, mRNA
(cDNA clone IMAGE:4252711), partial cds.
ACCESSION BC029382
VERSION BC029382.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1269)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1269)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46397362.
FEATURES Location/Qualifiers
source 1..1269
/db_xref="H-InvDB:HIT000040740"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4252711"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1269
/gene="AGGF1"
/gene_synonym="FLJ10283"
/gene_synonym="HSU84971"
/gene_synonym="HUS84971"
/gene_synonym="VG5Q"
/db_xref="GeneID:55109"
/db_xref="MIM:608464"
CDS <1..815
/gene="AGGF1"
/gene_synonym="FLJ10283"
/gene_synonym="HSU84971"
/gene_synonym="HUS84971"
/gene_synonym="VG5Q"
/codon_start=3
/product="AGGF1 protein"
/protein_id="AAH29382.2"
/db_xref="GeneID:55109"
/db_xref="MIM:608464"
/translation="REKDMEHTLRIPEVGVSKFHAEIYFDHDLQSYVPVDQGSQNGTI
VNGKQILQPKTKCDPYVLEHGDEVKIGETVLSFHIHPGSDTCDGCEPGQVRAHLRLDK
KDESFVGPTLSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQ
VGSEGTFQRDDAPASVHSEITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRR
THAGLGTGKPSSFEDVHLLQNKNKKNWDKARERFTENFPETKPQKDDPGTMP"
BASE COUNT 483 a 210 c 264 g 312 t
ORIGIN
1 gaagagaaaa ggatatggaa catactctcc gaatccctga agttggtgtc agtaagtttc
61 atgcagaaat ttattttgac catgacttac aaagttatgt ccctgtggat caaggcagtc
121 aaaatggcac aattgttaat ggaaaacaga ttcttcagcc gaaaactaaa tgtgaccctt
181 acgtacttga gcatggagat gaagtcaaaa ttggagaaac tgtcttatcc tttcacattc
241 atcctggcag tgatacctgt gatggctgtg aaccagggca ggttagagcc caccttcgcc
301 ttgataagaa agatgaatct tttgttggtc caacactaag taaggaggaa aaagagttgg
361 aaagaagaaa agaattaaag aaaatacgag taaaatatgg tttacagaat acagaatacg
421 aagatgaaaa gacattgaag aatccaaaat ataaagatag agctggaaaa cgtagggagc
481 aggttggaag tgaaggaact ttccaaagag atgatgctcc tgcatctgtt cattctgaaa
541 ttactgatag caacaaaggt cggaagatgt tggagaagat gggttggaag aaaggagagg
601 gcctggggaa ggatggtgga ggaatgaaaa cgccgatcca gcttcagctt cggcgaacac
661 atgcaggctt ggggacaggc aaaccatcct catttgaaga tgttcacctt ctccaaaaca
721 agaacaaaaa aaactgggac aaagcacgag agcggtttac tgaaaacttc ccagaaacta
781 agcctcaaaa agatgaccca gggaccatgc cttaggtaaa agggacttta gagtgaaggc
841 taatcataga aaaaaaacct ctagtttttt taaaaataga atttggaaac ttattttttc
901 tccccaaaag aatcagcagc acaggggaac tatgtcacag tttacctctt cctgattcag
961 aaatgtgtat ggtttgcagc ttttaaaaac cattttttta aaactaataa atagtgactg
1021 aaccaattta tgcagtaaat agactaaagt tcacagggca cggatgagtt tatcaaactt
1081 cgttatttta tcttgtcatt tacaacatcc atataagcaa ctagccatat aagcaaaatt
1141 catagaacta ctaatgactt aagtgtacat ctgttcttgt ctccatatat tcatgtaaga
1201 tgcacaacaa aagaaacatc agaagtttat aaaaatagga aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaa
//