LOCUS BC029118 1946 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 2, mRNA (cDNA clone
MGC:34065 IMAGE:5183639), complete cds.
ACCESSION BC029118
VERSION BC029118.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1946)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1946)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: e Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27545327.
FEATURES Location/Qualifiers
source 1..1946
/db_xref="H-InvDB:HIT000040681"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34065 IMAGE:5183639"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1946
/gene="LRRC2"
/db_xref="GeneID:79442"
/db_xref="HGNC:HGNC:14676"
/db_xref="MIM:607180"
CDS 166..1281
/gene="LRRC2"
/codon_start=1
/product="leucine rich repeat containing 2"
/protein_id="AAH29118.1"
/db_xref="GeneID:79442"
/db_xref="HGNC:HGNC:14676"
/db_xref="MIM:607180"
/translation="MGHKVVVFDISVIRALWETRVKKHKAWQKKEVERLEKSALEKIK
EEWNFVAECRRKGIPQAVYCKNGFIDTSVRLLDKIERNTLTRQSSLPKDRGKRSSAFV
FELSGEHWTELPDSLKEQTHLREWYISNTLIQIIPTYIQLFQAMRILDLPKNQISHLP
AEIGCLKNLKELNVGFNYLKSIPPELGDCENLERLDCSGNLELMELPFELSNLKQVTF
VDISANKFSSVPICVLRMSNLQWLDISSNNLTDLPQDIDRLEELQSFLLYKNKLTYLP
YSMLNLKKLTLLVVSGDHLVELPTALCDSSTPLKFVSLMDNPIDNAQCEDGNEIMESE
RDRQHFDKEVMKAYIEDLKERESVPSYTTKVSFSLQL"
BASE COUNT 612 a 386 c 457 g 491 t
ORIGIN
1 aaagaggaga acctccgctt accacagccg ggtagaaatg cctgaggaaa gcagcggagc
61 tgaccgtgcc agcatttaca cagggaacac ttcttgggca gccaggtgtc atggggcaca
121 gacccacagt tcctgagaat gaacaggtaa tttcatgctc ccaaaatggg acataaagtg
181 gttgtcttcg acatttctgt catcagagcc ttgtgggaaa ctcgtgtcaa gaagcacaaa
241 gcttggcaga agaaggaggt ggaaaggctt gagaagagcg ccttggagaa gataaaggag
301 gagtggaact ttgtggccga atgcaggagg aagggcatcc cccaggctgt atactgcaag
361 aatggcttca tagacaccag cgtgcggctt ctggacaaga ttgaaaggaa cactctcaca
421 aggcagagtt cacttcccaa ggacagaggc aaacggagca gtgcgtttgt gtttgaactt
481 tctggggagc actggacgga gctcccagat tcattgaagg agcagacaca cctgagagaa
541 tggtacataa gcaatacctt gattcaaatc attcctacat atattcagtt atttcaagcg
601 atgagaattc tggatctgcc aaaaaaccaa atctcacatc ttccagcaga aatcggttgt
661 ttgaagaacc tgaaagaact caatgtgggt ttcaactatc tgaagagcat tcctccagaa
721 ttgggagatt gtgaaaatct agagagactg gattgttctg gaaatctaga attaatggag
781 ctgccctttg aattaagtaa tttgaagcaa gttacatttg tagatatctc agcaaacaag
841 ttttccagtg tcccaatctg tgtcctgcgg atgtcgaatt tgcagtggtt ggatatcagc
901 agcaataacc tgaccgacct gccgcaagat atagacaggc tagaggagct gcagagcttt
961 ctcttgtata aaaacaagtt gacctacctt ccctattcca tgctgaacct gaagaagctc
1021 actctgttag tcgtcagtgg ggaccatttg gtggagctcc caactgccct ttgtgactca
1081 tccacacctt taaaatttgt aagccttatg gacaatccta ttgataatgc ccaatgtgaa
1141 gatggcaatg aaataatgga aagtgaacgg gatcgccaac attttgataa agaagttatg
1201 aaagcctata ttgaagacct taaagaaaga gaatctgttc ccagctatac caccaaagtg
1261 tcttttagcc ttcaactttg atatccatca gaagactgca aatctcacta ttctctggag
1321 ctatatataa atctttgtta tgatcatgtc atataggaag aatggcttgt gcttaaggac
1381 aaagtctaga aaccactatc atagttgcta aaaaaaatgg ttttcaaatg tcaaatacat
1441 gagtatctcc ctccatggac tggagaattg aaaaattggt ttgtatattg atatttccag
1501 gttcatttgc atatactttt ttccaaataa tgcacattta atatgtttta aaatgtctta
1561 tttttaagaa ttataactaa aagcccaaat actgaagtta agtgcattgt tttcaggaat
1621 caaaagataa aggggccggg tgtggtggct cacacctgta atcccagcac tttgggaggc
1681 cgaagtgggt ggatcacctg aggtccggag ttcgaggctg gtttggccag catggcgaaa
1741 ccccatctct actaaaaata caaaaaatta gctgggcatg gtggcagttg cctgtaatcc
1801 tagctactca ggaggctgag gcaggagaat cgcttgaacc tgggaggtgg agttgcagtg
1861 agccgagatc atgggactgc actccagcct gggtgacaga gccagactct gtcccaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaa
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