LOCUS BC028918 2171 bp mRNA linear HUM 16-AUG-2004
DEFINITION Homo sapiens TBC1 domain family, member 2, mRNA (cDNA clone
MGC:24859 IMAGE:4931447), complete cds.
ACCESSION BC028918
VERSION BC028918.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2171)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2171)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922166.
FEATURES Location/Qualifiers
source 1..2171
/db_xref="H-InvDB:HIT000040647"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24859 IMAGE:4931447"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2171
/gene="TBC1D2"
/gene_synonym="DKFZp761D1823"
/gene_synonym="PARIS-1"
/gene_synonym="PARIS1"
/db_xref="GeneID:55357"
CDS 340..1746
/gene="TBC1D2"
/gene_synonym="DKFZp761D1823"
/gene_synonym="PARIS-1"
/gene_synonym="PARIS1"
/codon_start=1
/product="TBC1D2 protein"
/protein_id="AAH28918.1"
/db_xref="GeneID:55357"
/translation="MEAYRTQNCFLNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNC
QVESKYLAGLRRLQEALGDEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDE
YGFLTVPDYEVEDLKLLAKIQALESRSHHLLGLEAVDRPLRERWAALGDLVPSAELKQ
LLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRGQAREHPAARQIELDLNRTF
PNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCL
VAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFL
VVFADSLISNILLRVWDAFLYEGTKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFF
TKTISNSRKLMNIAFNDMNPFRMKQLRQLRMVHRERLEAELRELEQLKAEYLERRASR
RRAVSEGCASEDEVEGEA"
BASE COUNT 531 a 612 c 588 g 440 t
ORIGIN
1 caactgccca gtaggttagt tggtatttgc cccttttaca gatgaggaaa cagagggtca
61 gagtggttca gtggcctgcc tgaggccttc cagccagaac atcagccagg acttaaattc
121 agacctactg gtccctttac cacatcatgc tgacatcaag aatagagaag ggtgctatga
181 gtattttatt tttctttcag acttcctctt ctgttgccat tattggaaat ttctaaggaa
241 aagaagcttt gggggctcat ttgagggtgt gactccccag gaccagggag atgtttatgt
301 ccaactgata acatatttta ctctcttctc caggatgaca tggaagctta ccggacccag
361 aactgcttcc tcaactccga gatccaccag gtcacaaaga tctggagaaa ggtggctgag
421 aaggagaagg cccttctgac gaagtgcgcc tacctccaag ccagaaactg ccaggtggaa
481 agcaagtacc tggccggtct gagaaggctg caggaggccc tgggggacga agccagcgag
541 tgctcagagc tgctgaggca gcttgtccag gaggcactgc agtgggaagc tggggaggcc
601 tcatctgaca gcatcgagct gagccccatc agtaagtatg atgagtacgg cttcctgacg
661 gtgcccgact atgaggtgga agacctgaag ctgctggcca agatccaggc gttggagtca
721 cgatcccacc acctgctggg cctcgaggct gtggatcggc cgctgaggga gcgctgggct
781 gccctgggcg atcttgtgcc ctcagccgag ctcaagcagc tactgcgggc aggagtaccc
841 cgtgaacacc ggcctcgtgt ctggaggtgg ctggtccacc tccgtgtcca gcacctgcac
901 actccaggct gctaccagga actgctgagc cggggccagg cccgcgagca ccctgctgcc
961 cgccagattg agctggacct gaaccggacc ttccccaaca acaaacactt cacctgcccc
1021 acctccagct tccccgacaa gctccgccgg gtgctgctgg ccttctcctg gcagaacccc
1081 accatcggct actgccaggg cctgaacagg ctggcggcca ttgccctgct ggtcctagag
1141 gaggaggaga gcgccttctg gtgcctggtg gccattgtgg agaccatcat gcccgctgat
1201 tactactgca acacgctgac ggcatcccag gtggaccagc gggtgctcca ggacctgctc
1261 tcggagaagc tgcccaggct gatggcccat ctggggcagc accacgtgga tctctccctc
1321 gtcaccttca actggttcct cgtggtcttt gcggacagtc tcattagcaa catcctcctt
1381 cgggtctggg atgccttcct gtacgagggg acgaaggtgg tgtttcgcta tgccttggcc
1441 attttcaagt acaacgagaa ggagatcttg aggctacaga atggcctgga aatctaccag
1501 tacctgcgct tcttcaccaa gaccatctcc aacagccgga agctgatgaa catcgccttc
1561 aatgacatga accccttccg catgaaacag ctgcggcagc tgcgcatggt ccaccgggag
1621 cggctggagg ctgagctgcg ggagctggag cagcttaagg cagagtacct ggagaggcgg
1681 gcatcccggc gcagagctgt gtccgagggc tgtgccagcg aggacgaggt ggagggggaa
1741 gcctgacttg gccacctccc ctccccacag ccttcctcac ccttggctgg cagacccact
1801 ggaggtcagg cacggaccag tggcccagcc ctgggtgtcc catcaccatg tgaccttgga
1861 catgtccctt cccctctctg gccctcagtt tccccactgg gacattgtgt gctgcaaagc
1921 cattggttgg gctacttctt cataggcact tacttaccca gggatgccac cctttcgtca
1981 cctcttccac agagcacttt ggcatgtaaa caagcaagag cactgcctct atagggtaac
2041 ctggaacatt ctctaggtta tatcaatata aaacaatgta aatggtggaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa a
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