LOCUS BC028894 963 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lymphocyte antigen 6 complex, locus H, mRNA (cDNA
clone MGC:24913 IMAGE:4939118), complete cds.
ACCESSION BC028894
VERSION BC028894.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 963)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 963)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574518.
FEATURES Location/Qualifiers
source 1..963
/db_xref="H-InvDB:HIT000040640"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24913 IMAGE:4939118"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..963
/gene="LY6H"
/gene_synonym="NMLY6"
/db_xref="GeneID:4062"
/db_xref="HGNC:HGNC:6728"
/db_xref="MIM:603625"
CDS 193..615
/gene="LY6H"
/gene_synonym="NMLY6"
/codon_start=1
/product="lymphocyte antigen 6 complex, locus H"
/protein_id="AAH28894.1"
/db_xref="GeneID:4062"
/db_xref="HGNC:HGNC:6728"
/db_xref="MIM:603625"
/translation="MLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQ
CQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDV
DCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP"
BASE COUNT 161 a 328 c 305 g 169 t
ORIGIN
1 ggtccgcgtc tgcggctgcg ttccccgaaa gacgaggctg cgcccggatt ccggtccgca
61 gggagaccga agggcacagc tccccgcgcc gcgcacgccg cccgagcccg gagtgcggac
121 acccccggga tgcttgcgcc ccagaggacc cgcgccccaa gcccccgcgc cgcccccagg
181 cccacccgga gcatgctgcc tgcagccatg aagggcctcg gcctggcgct gctggccgtc
241 ctgctgtgct cggcgcccgc tcatggcctg tggtgccagg actgcaccct gaccaccaac
301 tccagccatt gcaccccaaa gcagtgccag ccgtccgaca ccgtgtgtgc cagtgtccga
361 atcaccgatc ccagcagcag caggaaggat cactcggtga acaagatgtg tgcctcctcc
421 tgcgacttcg ttaagcgaca ctttttctca gactatctga tggggtttat taactctggg
481 atcttaaagg tcgacgtgga ctgctgcgag aaggatttgt gcaatggggc ggcaggggca
541 gggcacagcc cctgggccct ggccgggggg ctcctgctca gcctggggcc tgccctcctc
601 tgggctgggc cctgatgtct cttccttccc acggggcttc tgagcttgct cccctgagcc
661 tgtggctgcc ctctccccag cctggcgtgg ctggggctgg gggcagcctt ggcccagctc
721 cgtggctgtg gcctgtggct ctcactcctc ccccgacgtg aagcctccct gtctctccgc
781 cagctctgag tcccaggcag ctggacatct ccaggaaacc aggccatctg ggcaggaggc
841 ctggggatga gggtgggggg ggacctccag gtcccggagg ggaagtgaag caacagccca
901 gctggaaggg cgtcttctgc ggagaaataa agtcactttt gagtcctgaa aaaaaaaaaa
961 aaa
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