LOCUS BC028840 2800 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 13C, mRNA (cDNA clone MGC:39111
IMAGE:4558748), complete cds.
ACCESSION BC028840
VERSION BC028840.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2800)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67972410.
FEATURES Location/Qualifiers
source 1..2800
/db_xref="H-InvDB:HIT000040639"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39111 IMAGE:4558748"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2800
/gene="ANKRD13C"
/gene_synonym="dJ677H15.3"
/gene_synonym="DKFZP566D1346"
/gene_synonym="RP4-677H15.5"
/db_xref="GeneID:81573"
/db_xref="HGNC:HGNC:25374"
CDS 316..1941
/gene="ANKRD13C"
/gene_synonym="dJ677H15.3"
/gene_synonym="DKFZP566D1346"
/gene_synonym="RP4-677H15.5"
/codon_start=1
/product="ankyrin repeat domain 13C"
/protein_id="AAH28840.1"
/db_xref="GeneID:81573"
/db_xref="HGNC:HGNC:25374"
/translation="MTGEKIRSLRRDHKPSKEEGDLLEPGDEEAAAALGGTFTRSRIG
KGGKACHKIFSNHHHRLQLKAAPASSNPPGAPALPLHNSSVTANSQSPALLAGTNPVA
VVADGGSCPAHYPVHECVFKGDVRRLSSLIRTHNIGQKDNHGNTPLHLAVMLGNKECA
HLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEEKRPRLLKA
LKELGDFYLELHWDFQSWVPLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGD
LSFIFNGDAAPSESFVVLDNEQKVYQRIHHEESEMETEEEVDILMSSDIYSATLSTKS
ISFTRAQTGWLFREDKTERVGNFLADFYLVNGLVLESRKRREHLSEEDILRNKAIMES
LSKGGNIMEQNFEPIRRQSLSPPPQNTITWEEYISAENGKAPHLGRELVCKESKKTFK
ATIAMSQEFPLGIELLLNVLEVVAPFKHFNKLREFVQMKLPPGFPVKLDIPVFPTITA
TVTFQEFRYDEFDGSIFTIPDDYKEDPSRFPDL"
BASE COUNT 803 a 600 c 635 g 762 t
ORIGIN
1 agagagagag gaagatggcc gtgccctgtt tttcggtgta aggcagcgac ggcggctgcg
61 acggcgagac tgagatcctg gtgtcgtggg cacctgagtt ctagcttccc ccagcgagcg
121 cgcgtccctt cgtgcctagg cgagagccgg ctcttccccg ggagatgcgt ttgtcccagg
181 ctcgggggct cagtgggagt tcatgctgcg ctggaggctc ttggccaccg ctctaatcgc
241 cttgtgccgc cgcagcgcca gctccgtcgc cagcggtgag cctcccgatt cccccccttg
301 cccctggcgg cggcgatgac cggggagaag atccgctcac tgcggaggga ccacaagccc
361 agcaaagaag aaggggacct gctggagccc ggggatgagg aagcggcggc tgccctcggc
421 ggtaccttta ccagaagcag gattggcaag ggcggcaaag cttgtcataa gatcttcagt
481 aaccatcacc accggctaca gctgaaggca gctccggcct cctccaatcc ccccggcgcc
541 ccggctctgc cgctgcacaa ttcctccgtg actgccaact cccagtcccc ggcccttctg
601 gccggcacca accccgttgc tgtcgtcgcg gatggaggca gttgccccgc acactacccg
661 gtgcacgagt gcgtcttcaa gggggatgtg aggagactct cctctctcat ccgcacgcac
721 aatatcgggc agaaagataa tcacggaaat actcctttac accttgctgt gatgttagga
781 aataaagaat gtgcccattt acttttggct cacaatgctc cagtcaaggt gaaaaatgct
841 cagggatgga gccctctggc ggaagccatc agctatggag ataggcagat gattacagct
901 cttttgagga agcttaagca gcaatccagg gaaagtgttg aagaaaaacg acctcgatta
961 ttaaaagccc tgaaagagct aggtgacttt tatctagaac ttcactggga ttttcaaagc
1021 tgggtgcctt tactttcccg aattctgcct tccgatgcat gtaaaatata caaacaaggt
1081 atcaatatca ggcttgacac aactctcata gactttactg acatgaagtg ccaacgaggg
1141 gatctaagct tcattttcaa tggggatgcg gcgccctctg aatcttttgt agtattagac
1201 aatgaacaaa aagtttatca gcgaatacat catgaggaat cagagatgga aacagaagaa
1261 gaggtggata ttttaatgag cagtgatatt tactctgcaa ctttatcaac aaaatcaatt
1321 tctttcacgc gtgcccagac aggatggctt tttcgggaag ataaaacaga aagagtagga
1381 aactttttgg cagactttta cctggtgaat ggacttgttt tagaatcaag gaaaagaaga
1441 gaacatctca gtgaagagga tattcttcga aataaggcca tcatggagag tttgagtaaa
1501 ggtggaaaca taatggaaca gaattttgag ccgattcgaa gacagtctct ttcacctcct
1561 cctcagaaca ctattacatg ggaagaatat atatctgctg aaaatggaaa agctcctcat
1621 ctgggtagag aattggtgtg caaagagagt aagaaaacgt ttaaagctac gatagccatg
1681 agccaggaat ttcccttagg gatagagtta ttattgaatg ttttagaagt agtagctccc
1741 ttcaagcact ttaacaagct tagagaattt gttcagatga agcttcctcc aggctttcct
1801 gtaaaattag atatacctgt gtttcccaca atcacagcca ctgtgacttt tcaggagttt
1861 cgatacgatg aatttgatgg ctccatcttt actatacctg atgactacaa ggaagaccca
1921 agccgttttc ctgatcttta actgacgtgg aaaaggatgc cgtctaacca aggaaagaaa
1981 atacagagac cctagaagtg gatccaaata gaagggacaa atgctttcag tgaagaaaag
2041 ggaattacac attgaatcga cacatcagta atacgataca gtgaaatggg cctctaataa
2101 gaatttcagc gagttttctg atgtgccatt ttttgtcttt ttaaaaatat acatattata
2161 aatgtaatag tttgacacat taatgaccct aagacctgcg tatgtgaagc agctatgagt
2221 gctgtgattt gtttttaaaa atttttacac ttcttgttga aatatatatg catataaata
2281 tatctatatc tatatctata tctaaaacac tcctggacca ttaacgtaaa ttaaatgtct
2341 taagagatat ggagcccttt taaacttgtc atctttatgc aaggtgacat ttataaatat
2401 tccttcgagc tttgttttca taaaatgtaa actatgtaac attatgtata gttcagtaat
2461 ttgaatgttt gttcaatata atgaactaga aggaatgcaa ttttctgtag atgaatgaac
2521 caaatggtaa ccattaaaca attgcattta tatgttgcaa tacatttcag aaggagcgtt
2581 cactctgcag ggaataaggt acctccttta gcaccttagt gcaattcatt gtggtgctat
2641 ttgtttttac ctgaatgttt gttactaatc ttcctttcat agaacctcta tttttttttt
2701 tctaaacttg agtttgagtc cttgttatgg tcatcataag gtaatggtta gcatgtttaa
2761 agatattcct cttccaaatc tcagcacttt aaaaaaaaaa
//