LOCUS BC028704 4071 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens arrestin domain containing 4, mRNA (cDNA clone
MGC:26929 IMAGE:4838787), complete cds.
ACCESSION BC028704
VERSION BC028704.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4071)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4071)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028704.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34419646.
FEATURES Location/Qualifiers
source 1..4071
/db_xref="H-InvDB:HIT000050956_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26929 IMAGE:4838787"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4071
/gene="ARRDC4"
/gene_synonym="FLJ36045"
/db_xref="GeneID:91947"
/db_xref="HGNC:HGNC:28087"
CDS 150..1406
/gene="ARRDC4"
/gene_synonym="FLJ36045"
/codon_start=1
/product="arrestin domain containing 4"
/protein_id="AAH28704.2"
/db_xref="GeneID:91947"
/db_xref="HGNC:HGNC:28087"
/translation="MGGEAGCAAAVGAEGRVKSLGLVFEDERKGCYSSGETVAGHVLL
EASEPVALRALRLEAQGRATAAWGPSTCPRASASAAALAVFSEVEYLNVRLSLREPPA
GEGIILLQPGKHEFPFRFQLPSEPLVTSFTGKYGSIQYCVRAVLERPKVPDQSVKREL
QVVSHVDVNTPALLTPVLKTQEKMVGCWFFTSGPVSLSAKIERKGYCNGEAIPIYAEI
ENCSSRLIVPKAAIFQTQTYLASGKTKTIRHMVANVRGNHIASGSTDTWNGKTLKIPP
VTPSILDCCIIRVDYSLAVYIHIPGAKKLMLELPLVIGTIPYNGFGSRNSSIASQFSM
DMSWLTLTLPEQSEAPPNYADVVPEEEFSRHIPPYPQPPNCEGEVCCPVFACIQEFRF
QPPPLYSEVDPHPSDVEESQPVSFIL"
BASE COUNT 1138 a 826 c 932 g 1175 t
ORIGIN
1 tgggggagcc ggtgccccat cgggtaccgc acggctgccg cggcggcctt accctgccgc
61 gagcgcctgt gacagcggcg ccgctgtgct cgcgaccccg gctccgggcc tctgccgacc
121 tcaggggcag gaaagagtcg cccggcggga tgggcggcga ggctgggtgc gcggcggccg
181 tgggtgccga gggccgcgtg aagagcctgg gtctggtgtt cgaggacgag cgcaagggct
241 gctattccag cggcgagaca gtggccgggc acgtgctgct ggaggcgtcc gagccggtgg
301 ccctgcgcgc gctgcgcctg gaggcccagg ggcgcgccac cgccgcctgg ggcccgagca
361 cctgcccccg cgcctcggcc agcgccgcgg ccctggctgt cttctcggag gtggagtacc
421 tgaacgtgcg cctcagcctg cgggagcccc cggccggtga aggcatcatt ttattacagc
481 ctggaaaaca tgaatttcca tttcgctttc aacttccatc tgaacctttg gtcacctcgt
541 ttactgggaa atatggaagc attcagtact gtgtgcgggc agtgttggaa cgacccaagg
601 tacctgatca gagtgtaaag cgggaactcc aggttgttag tcatgtcgat gtcaacacac
661 cagcattatt aacccctgta ttgaaaactc aagagaaaat ggttggctgt tggtttttca
721 cttctggtcc agtctcgctg agtgccaaaa ttgaaagaaa gggatactgt aatggagaag
781 ctattccaat ctatgcagaa atagaaaatt gttcctctcg tctgattgtt ccaaaggctg
841 ctattttcca aacgcagaca tatttggcta gtggaaaaac aaagaccatt cgacacatgg
901 tcgccaatgt gcgaggaaac cacatcgctt ctgggagcac agacacatgg aatgggaaaa
961 cgctaaaaat cccacctgtt actccatcca tcctggattg ctgcattatc agagtggact
1021 attccttagc tgtatacatt cacattcctg gtgctaaaaa attgatgctc gaactgccat
1081 tagtgatcgg tacaattcca tataatggtt ttggcagcag aaactccagc attgccagcc
1141 agttcagtat ggatatgagc tggttgacac tgaccctgcc agagcagtct gaagcaccac
1201 caaattatgc agatgtggta ccagaggaag aattctctag acacattcct ccttaccctc
1261 aaccccctaa ctgtgaggga gaagtgtgct gtcctgtgtt tgcctgtata caagaattcc
1321 ggtttcaacc cccacctctt tattcagagg ttgacccaca tcctagcgac gtagaagaga
1381 gccagcctgt ttccttcatt ctctgaacgt atttcagaaa tcactgtgtt catcatcaaa
1441 ttagaatgtt ggttcttttc cttctgcctt tttgggagag agacaggaaa gattcacttg
1501 aaaacataaa tgaacgtcaa gactgaaggc aatagaaatt aaagaatgtg agaaagttct
1561 ggtgggccgg caggattgcc gcacaagttt atatgatggt cgtatatata tccctgttaa
1621 aaactgggat gaagatgtgc aaagtcacag aatgtaatgg aagtcctgat ggttacagag
1681 taagtgaaag ggtgcctgcg ctgacgtgag agaaaggaat ctgtaaacag tggaaacact
1741 gtgggagttt cccatggtgt tttgaagagt ggaacgaagg cgatatgaac tgaaggggtg
1801 aagacttgat tttggagagg gcaacaaaac aagggtgtgt gtgcatagga gaatggccca
1861 ctccaaatac gaagtgagat cctgagtctt tgggtgcttc atgatttcct accatattca
1921 ggcctaaaga cattgaaaaa gcatcttttc ttgagatcat ggtcatatga ggtcctaatg
1981 aagtactaca gttttcattc tttcaagggt agactaaaat atagtttata aatcggcagt
2041 acagtattat gaaaccaaga aagggtttct tgaaaagctt gtcggttcaa agaggaaaga
2101 tgaatttcaa tgtgaaaaca cgttttgttg agggctgtac tttttacccc ctttaagtgc
2161 tttaacagga tatacgtttg attttcctca tatcttattt acctaggagc atgtcagaga
2221 aagaagggag agaaaaggtt gcatctgcag gatgccttga taactacaca gtcccaaata
2281 aaaggccttt ttctaaccta cctctaatgg ggttatcaga tatgttttta aatctctcgc
2341 cctgagtact cttcttggga gttgctgctg tttacagcca cagtctcatc tatcactaaa
2401 tatgaaactg ggccaagggg aaaattcagt aagttagcgt taaatggaag taaatatatg
2461 tatacctaag agaatgtcaa aataaacacc aaaccaaaag aaggtaggag tgccattttt
2521 agaaaagaca caactttaat tcctgtcaag agacctaggt ctactgatgg cagtcactgc
2581 attgtacatt attccagttc ttcagtaatt ctgtttaaac tgtgattttc tttattgtgt
2641 tggtgcaata ttttattatc atttaacctc aggatattca gaccaacagg attgtgttgc
2701 tgctgaaagt ctgagcagtg ttttaccgtc cccagccccc ctcccacatg gtcacatgtt
2761 cacttgcttt tccttccatc tgttggtttt gtgagctgag agcatctctg gacacatgga
2821 agggagccag ggattcctgt gatacagatt ttgaaccagc agagtacttt ggttttcttc
2881 atgtcctaag ggtttgatcc agaaaccctg gtgcttcccc tgcagaatac tgtacttcat
2941 ttaacagaat gattgatttt tctttcaatc agcatgttca ccaaaaatag aaaagttctt
3001 ctaaggttaa attttgtatt taaaagttag ttggccattt gatcagggaa ttttctacac
3061 acattaggca aatgtatgct tttcatcctc tgggcttacc tctctcctct gcaatcctgg
3121 aagcattgtg catagttctt tcattgtaag ccgctattta aattcccaca atgcaaaact
3181 gttagaccag taattgtgct actgaaattg tcacaaaacg ttattccttg atttggtttt
3241 taaattttgc ttttgtgtgt gtgtctttaa acaggtaatg tgtatttaag tgttgtctaa
3301 acagttgatt tttactttag aaaagatcat cttcaactgt ttattgactt ctgagttata
3361 tagttcatgc cctgccaagg cattgttcga ctccatgata ctaaaacata atgaaagaaa
3421 caaactccag tatggagaag agaaagttta attatttggt tccatctaga aaagcaacaa
3481 cttaaaggaa tccttcacta ggattgtctt atcaccttta ttagataaat catgtagtgt
3541 ccctgtgaaa ttgaagtgaa actatctctg taggacttaa gagaatagct aaaaggtgtg
3601 acttgcctta ttgaactgat actggcatat ctgactgtaa gcagtaggtt gaagatatca
3661 ttttatgaat gtggagaatt ctacattgaa acagaaaata cctgggaatg aagattaaaa
3721 atgtagctgc tgttatttgc ttggtgattc ccctcttgct cttctttagt ttgaaaaaac
3781 aaaaacgtgg ccttggaatt ttcattttga tgcagaaatt ttgaaattga aaatgtgcat
3841 gttttggtgc acaaaatcct tctgtgggca aaactttgtt tttgttttgc acagtaagaa
3901 acaataggca agcgttatgt ttttggtaag ttaactatga aagctttctt atttttatta
3961 ttaaaaatgt aacaatttaa cccacaggaa aaaaaattac tttgtatgct tgtttgaacc
4021 ctatgggttc gttttattaa taaaattatt acacaaaaaa aaaaaaaaaa a
//