LOCUS BC028629 1901 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) A receptor, alpha 3,
mRNA (cDNA clone MGC:33793 IMAGE:5261326), complete cds.
ACCESSION BC028629
VERSION BC028629.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1901)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1901)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: f Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34734069.
FEATURES Location/Qualifiers
source 1..1901
/db_xref="H-InvDB:HIT000040595"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33793 IMAGE:5261326"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1901
/gene="GABRA3"
/gene_synonym="MGC33793"
/db_xref="GeneID:2556"
/db_xref="HGNC:HGNC:4077"
/db_xref="MIM:305660"
CDS 240..1718
/gene="GABRA3"
/gene_synonym="MGC33793"
/codon_start=1
/product="gamma-aminobutyric acid (GABA) A receptor, alpha
3"
/protein_id="AAH28629.1"
/db_xref="GeneID:2556"
/db_xref="HGNC:HGNC:4077"
/db_xref="MIM:305660"
/translation="MIITQTSHCYMTSLGILFLINILPGTTGQGESRRQEPGDFVKQD
IGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSF
GPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSV
AHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAE
VVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIG
YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAY
ATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMKKKTPAAPAKKT
STTFNIVGTTYPINLAKDTEFSTISKGAAPSASSTPTIIASPKATYVQDSPTETKTYN
SVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ"
BASE COUNT 528 a 493 c 437 g 443 t
ORIGIN
1 agcgggagag agagagagag agagagagag agcgagagag cgtgagcgcg cgcaagctag
61 cgagcaaacc agagagacag accgagagag ggaccaggag agagacccag agagagaaga
121 agaagccaga agccgagctc tgtcagggct caacctccaa cttgtttcag ttcattcatc
181 cttctctcct ttccgctcag actgtagagc tcggtctctc caagtttgtg cctaagaaga
241 tgataatcac acaaacaagt cactgttaca tgaccagcct tgggattctt ttcctgatta
301 atattctccc tggaaccact ggtcaagggg aatcaagacg acaagaaccc ggggactttg
361 tgaagcagga cattggcggg ctgtctccta agcatgcccc agatattcct gatgacagca
421 ctgacaacat cactatcttc accagaatct tggatcgtct tctggacggc tatgacaacc
481 ggctgcgacc tgggcttgga gatgcagtga ctgaagtgaa gactgacatc tacgtgacca
541 gttttggccc tgtgtcagac actgacatgg agtacactat tgatgtattt tttcggcaga
601 catggcatga tgaaagactg aaatttgatg gccccatgaa gatccttcca ctgaacaatc
661 tcctggctag taagatctgg acaccggaca ccttcttcca caatggcaag aaatcagtgg
721 ctcataacat gaccacgccc aacaagctgc tcagattggt ggacaacgga accctcccct
781 atacaatgag gttaacaatt catgctgagt gtcccatgca tttggaagat tttcccatgg
841 atgtgcatgc ctgcccactg aagtttggaa gctatgccta tacaacagct gaagtggttt
901 attcttggac tctcggaaag aacaaatccg tggaagtggc acaggatggt tctcgcttga
961 accagtatga ccttttgggc catgttgttg ggacagagat aatccggtct agtacaggag
1021 aatatgtcgt catgacaacc cacttccatc tcaagcgaaa aattggctac tttgtgatcc
1081 agacctactt gccatgtatc atgactgtca ttctgtcaca agtgtcgttc tggctcaaca
1141 gagagtctgt tcctgcccgt acagtctttg gtgtcaccac tgtgcttacc atgaccacct
1201 tgagtatcag tgccagaaat tccttaccta aagtggcata tgcgacggcc atggactggt
1261 tcatagccgt ctgttatgcc tttgtatttt ctgcactgat tgaatttgcc actgtcaact
1321 atttcaccaa gcggagttgg gcttgggaag gcaagaaggt gccagaggcc ctggagatga
1381 agaagaaaac accagcagcc ccagcaaaga aaaccagcac taccttcaac atcgtgggga
1441 ccacctatcc catcaacctg gccaaggaca ctgaattttc caccatctcc aagggcgctg
1501 ctcccagtgc ctcctcaacc ccaacaatca ttgcttcacc caaggccacc tacgtgcagg
1561 acagcccgac tgagaccaag acctacaaca gtgtcagcaa ggttgacaaa atttcccgca
1621 tcatctttcc tgtgctcttt gccatattca atctggtcta ttgggccaca tatgtcaacc
1681 gggagtcagc tatcaagggc atgatccgca aacagtagat agtggtggca gtgcagcaac
1741 cagagcactg tataccccgt gaagcatcca ggcacccaaa ccccggggct ccccttcgcg
1801 tatttcagga ttctcctttt tacccctcta ccaagctgtg accctcaatt catatttatg
1861 aatctctacg caaaaaataa ctacagaaaa aaaaaaaaaa a
//