LOCUS BC028599 2447 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens adaptor protein, phosphotyrosine interaction, PH
domain and leucine zipper containing 1, mRNA (cDNA clone MGC:33057
IMAGE:4829430), complete cds.
ACCESSION BC028599
VERSION BC028599.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2447)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2447)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028599.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912241.
FEATURES Location/Qualifiers
source 1..2447
/db_xref="H-InvDB:HIT000040584"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33057 IMAGE:4829430"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2447
/gene="APPL1"
/gene_synonym="APPL"
/gene_synonym="DIP13alpha"
/db_xref="GeneID:26060"
/db_xref="HGNC:HGNC:24035"
/db_xref="MIM:604299"
CDS 148..2277
/gene="APPL1"
/gene_synonym="APPL"
/gene_synonym="DIP13alpha"
/codon_start=1
/product="adaptor protein, phosphotyrosine interaction, PH
domain and leucine zipper containing 1"
/protein_id="AAH28599.1"
/db_xref="GeneID:26060"
/db_xref="HGNC:HGNC:24035"
/db_xref="MIM:604299"
/translation="MPGIDKLPIEETLEDSPQTRSLLGVFEEDATAISNYMNQLYQAM
HRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSSCHAV
LSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVK
YEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENL
NEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEVASDPLYVPDPDPTKFPVNRN
LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVD
CEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLSENPEETAARVNQ
SALEAVTPSPSFQQRHESLRPAAGQSRPPTARTSSSGSLGSESTNLAALSLDSLVAPD
TPIQFDIISPVCEDQPGQAKAFGQGGRRTNPFGESGGSTKSETEDSILHQLFIVRFLG
SMEVKSDDHPDVVYETMRQILAARAIHNIFRMTESHLLVTCDCLKLIDPQTQVTRLTF
PLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQ
IALHAELDRRASEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSE
GQFVVLSSSQSEESDLGEGGKKRESEA"
BASE COUNT 785 a 473 c 577 g 612 t
ORIGIN
1 gctcggcgcc tggagaaggc tgtgcgggcg gggacggctg cagcccttgc cggagagggc
61 gggccggggt cagctgcggc gggcgggccg gcgcggggag ctgtgggcgg cagctgcgtc
121 tcctgccacc gccctccctc cgccacgatg ccggggatcg acaagctgcc catcgaggag
181 acgctggagg acagcccgca gacaaggtct ttactgggtg tatttgaaga agatgccaca
241 gctatttcca actatatgaa ccagttgtat caagctatgc atcggattta tgatgcacag
301 aatgaattaa gtgcagcaac acacctgacc tcaaaacttt taaaagaata tgaaaaacag
361 cgttttccat tgggaggtga tgatgaagtt atgagctcta cattgcaaca gttttcaaaa
421 gttatagatg agcttagctc ttgtcatgca gtgctttcaa ctcaacttgc tgatgccatg
481 atgttcccca ttacccagtt taaagaaaga gatctgaaag aaatactaac attaaaggaa
541 gtatttcaga ttgcaagtaa tgatcatgat gctgcgatta atagatatag ccgtttatca
601 aaaaaaagag aaaatgacaa ggtgaagtat gaagtaacag aagatgtgta cacatccaga
661 aagaaacaac accagaccat gatgcattat ttttgtgcat taaatactct tcagtacaag
721 aagaaaatag cattgttaga acctctactt gggtacatgc aagctcagat aagtttcttt
781 aagatgggtt ctgaaaatct taatgaacaa ctggaagaat ttttagctaa tattggaaca
841 agcgttcaga atgttcgcag ggaaatggac agtgatatag agaccatgca acagacaata
901 gaggatttgg aagtagccag tgatccctta tatgtgcctg acccagaccc caccaaattt
961 cctgttaatc gaaatttaac ccgaaaggct ggatacctta atgctaggaa taaaacaggc
1021 ttggtgtcat ctacctggga cagacagttt tacttcacgc agggtggaaa tttaatgagt
1081 caggcccgtg gggatgtagc aggaggcctg gccatggaca tagacaactg ttcagtgatg
1141 gctgtggact gtgaagacag acgatattgt tttcagatca cctctttcga tggaaaaaaa
1201 tcttcaattt tgcaagcaga gagtaaaaaa gatcatgaag agtggatctg tacaataaac
1261 aacatatcta aacaaatata cttaagtgaa aatccagagg aaactgctgc acgagtaaat
1321 caatcagctc tggaagctgt cactccttcc ccatctttcc agcagaggca cgagagcctg
1381 cggccagcag caggacaatc tcggccaccg acagctcgaa ccagcagttc aggatcctta
1441 ggatctgagt ctacaaattt ggctgccctc tctctagatt ctcttgttgc cccagacacc
1501 ccaatacagt ttgacataat ttctcctgtg tgtgaagatc agcctggcca ggcaaaagcc
1561 tttggccagg gaggcaggcg tacaaatcca tttggagaat ctggaggaag tacaaaatct
1621 gaaactgaag attctattct tcatcagtta tttattgtcc gattccttgg ttcaatggag
1681 gtgaaatcag atgaccatcc agatgttgtt tatgaaacta tgcgccaaat cttagctgcc
1741 cgggccatcc ataacatctt tcgtatgaca gaatcgcatt tattagtcac ttgtgactgt
1801 ttaaagttaa ttgatccaca gacacaagtt acaaggctca cgtttccatt accttgtgta
1861 gttttgtatg ctacacacca ggaaaataag cgcctttttg gatttgttct tcggacatca
1921 agcgggagaa gtgaaagtaa tctgtcatca gtctgctata tatttgagtc aaacaatgag
1981 ggggaaaaga tatgtgattc tgttggactg gcaaaacaga tagctttgca tgctgaactg
2041 gatcgtaggg catcagaaaa acaaaaagaa atagagagag taaaagagaa gcaacagaaa
2101 gaactcaata aacaaaaaca gattgaaaag gacttggaag aacaaagtcg gttgatagct
2161 gcttccagta gaccaaacca agccagtagt gaggggcagt ttgttgtcct tagcagtagc
2221 cagtcagaag agagtgattt gggagaagga ggaaagaaga gagaatcaga agcataagct
2281 tatacttttg gtagatattc ccccttggaa tttgacagtt tctatggtga aatggcagaa
2341 ggtaacaact atgttgaaat atcaaggagg agattaagct ttatatttgc ttatttgttg
2401 tagctacatt ttaaaaaaaa gattgaactt gaaaaaaaaa aaaaaaa
//