LOCUS BC028578 4089 bp mRNA linear HUM 27-JUL-2005
DEFINITION Homo sapiens baculoviral IAP repeat-containing 2, mRNA (cDNA clone
MGC:26517 IMAGE:4831062), complete cds.
ACCESSION BC028578
VERSION BC028578.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4089)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4089)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: j Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349435.
FEATURES Location/Qualifiers
source 1..4089
/db_xref="H-InvDB:HIT000050952"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26517 IMAGE:4831062"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4089
/gene="BIRC2"
/gene_synonym="cIAP1"
/gene_synonym="Hiap-2"
/gene_synonym="HIAP2"
/gene_synonym="MIHB"
/gene_synonym="RNF48"
/db_xref="GeneID:329"
/db_xref="MIM:601712"
CDS 1731..3587
/gene="BIRC2"
/gene_synonym="cIAP1"
/gene_synonym="Hiap-2"
/gene_synonym="HIAP2"
/gene_synonym="MIHB"
/gene_synonym="RNF48"
/codon_start=1
/product="BIRC2 protein"
/protein_id="AAH28578.1"
/db_xref="GeneID:329"
/db_xref="MIM:601712"
/translation="MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFS
CELYRMSTYSTFPAGVPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQK
HKQLYPSCSFIQNLVSASLGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNP
LNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRV
ACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTF
MYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCE
FLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMN
TPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQA
EEMASDDLSLIRKNRMALFQQLTCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARE
LIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQ
EERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS"
BASE COUNT 1252 a 690 c 859 g 1288 t
ORIGIN
1 agcgggagtg ctgctccttc cgggctcggg cggcgtgggg cgggtgggga cgcgagggcc
61 cgcgggggcc cacttccctg atgtggcggc cgaacgagga aggacggggc ctgaggccct
121 tcggccaagg gtcgagggtc gccgggggct ctctgctttc tactctcgcc aaggttttat
181 tggattcgga agccccaact tcgagacttg cagtcaaagc gatttttaaa atgacttgtt
241 ttcaagcctc tggccgccgc ccactcttct ggcccttgga ctttgaccaa gatgttttct
301 cgcagttttt gcaaggtttt aaacttagcc ctcggcgttc ttttaatgta atacattgaa
361 acgaagatat ttcggtggcg gcgatatttc atatttcata gttgccactg cgctctgtca
421 ttccagtagt cgtctgttgt gtattgtgag aagcaactct gggaaattat tggatttaca
481 accctgaaga atctccctat ccctattttg tccccctgca gtaataaatc ccattatgga
541 gatctcgaaa ctttataaag ggatatagtt tgaattctat ggagtgtaat tttgtgtatg
601 aattatattt ttaaaacatt gaagagtttt cagaaagaag gctagtagag ttgattactg
661 atactttatg ctaagcagta cttttttggt agtacaatat tttgttaggc gtttctgata
721 acactagaaa ggacaagttt tatcttgtga taaattgatt aatgtttaca acatgactga
781 taattatagc tgaatagtcc ttaaatgatg aacaggttat ttagttttta aatgcagtgt
841 aaaaagtgtg ctgtggaaat tttatggcta actaagttta tggagaaaat accttcagtt
901 gatcaagaat aatagtggta tacaaagtta ggaagaaagt caacatgatg ctgcaggaaa
961 tggaaacaaa tacaaatgat atttaacaaa gatagagttt acagtttttg aactttaagc
1021 caaattcatt tgacatcaag cactatagca ggcacaggtt caacaaagct tgtgggtatt
1081 gacttccccc aaaagttgtc agctgaagta atttagccca cttaagtaaa tactatgatg
1141 ataagctgtg tgaacttagc ttttaaatag tgtgaccata tgaaggtttt aattactttt
1201 gtttattgga ataaaatgag attttttggg ttgtcatgtt aaagtgctta tagggaaaga
1261 agcctgcata taatttttta ccttgtggca taatcagtaa ttggtctgtt attcaggctt
1321 catagcttgt aaccaaatat aaataaaagg cataatttag gtattctata gttgcttaga
1381 attttgttaa tataaatctc tgtgaaaaat caaggagttt taatattttc agaagtgcat
1441 ccacctttca gggctttaag ttagtattac tcaagattat gaacaaatag cacttaggtt
1501 acctgaaaga gttactacaa ccccaaagag ttgtgttcta agtagtatct tggtaattca
1561 gagagatact catcctacct gaatataaac tgagataaat ccagtaaaga aagtgtagta
1621 aattctacat aagagtctat cattgatttc tttttgtggt aaaaatctta gttcatgtga
1681 agaaatttca tgtgaatgtt ttagctatca aacagtactg tcacctactc atgcacaaaa
1741 ctgcctccca aagacttttc ccaggtccct cgtatcaaaa cattaagagt ataatggaag
1801 atagcacgat cttgtcagat tggacaaaca gcaacaaaca aaaaatgaag tatgactttt
1861 cctgtgaact ctacagaatg tctacatatt caactttccc cgccggggtg cctgtctcag
1921 aaaggagtct tgctcgtgct ggtttttatt atactggtgt gaatgacaag gtcaaatgct
1981 tctgttgtgg cctgatgctg gataactgga aactaggaga cagtcctatt caaaagcata
2041 aacagctata tcctagctgt agctttattc agaatctggt ttcagctagt ctgggatcca
2101 cctctaagaa tacgtctcca atgagaaaca gttttgcaca ttcattatct cccaccttgg
2161 aacatagtag cttgttcagt ggttcttact ccagcctttc tccaaaccct cttaattcta
2221 gagcagttga agacatctct tcatcgagga ctaaccccta cagttatgca atgagtactg
2281 aagaagccag atttcttacc taccatatgt ggccattaac ttttttgtca ccatcagaat
2341 tggcaagagc tggtttttat tatataggac ctggagatag ggtagcctgc tttgcctgtg
2401 gtgggaagct cagtaactgg gaaccaaagg atgatgctat gtcagaacac cggaggcatt
2461 ttcccaactg tccatttttg gaaaattctc tagaaactct gaggtttagc atttcaaatc
2521 tgagcatgca gacacatgca gctcgaatga gaacatttat gtactggcca tctagtgttc
2581 cagttcagcc tgagcagctt gcaagtgctg gtttttatta tgtgggtcgc aatgatgatg
2641 tcaaatgctt ttgttgtgat ggtggcttga ggtgttggga atctggagat gatccatggg
2701 tagaacatgc caagtggttt ccaaggtgtg agttcttgat acgaatgaaa ggccaagagt
2761 ttgttgatga gattcaaggt agatatcctc atcttcttga acagctgttg tcaacttcag
2821 ataccactgg agaagaaaat gctgacccac caattattca ttttggacct ggagaaagtt
2881 cttcagaaga tgctgtcatg atgaatacac ctgtggttaa atctgccttg gaaatgggct
2941 ttaatagaga cctggtgaaa caaacagttc aaagtaaaat cctgacaact ggagagaact
3001 ataaaacagt taatgatatt gtgtcagcac ttcttaatgc tgaagatgaa aaaagagaag
3061 aggagaagga aaaacaagct gaagaaatgg catcagatga tttgtcatta attcggaaga
3121 acagaatggc tctctttcaa caattgacat gtgtgcttcc tatcctggat aatcttttaa
3181 aggccaatgt aattaataaa caggaacatg atattattaa acaaaaaaca cagatacctt
3241 tacaagcgag agaactgatt gataccattt tggttaaagg aaatgctgcg gccaacatct
3301 tcaaaaactg tctaaaagaa attgactcta cattgtataa gaacttattt gtggataaga
3361 atatgaagta tattccaaca gaagatgttt caggtctgtc actggaagaa caattgagga
3421 ggttgcaaga agaacgaact tgtaaagtgt gtatggacaa agaagtttct gttgtattta
3481 ttccttgtgg tcatctggta gtatgccagg aatgtgcccc ttctctaaga aaatgcccta
3541 tttgcagggg tataatcaag ggtactgttc gtacatttct ctcttaaaga aaaatagtct
3601 atattttaac ctgcataaaa aggtctttaa aatattgttg aacacttgaa gccatctaaa
3661 gtaaaaaggg aattatgagt ttttcaatta gtaacattca tgttctagtc tgctttggta
3721 ctaataatct tgtttctgaa aagatggtat catatattta atcttaatct gtttatttac
3781 aagggaagat ttatgtttgg tgaactatat tagtatgtat gtgtacctaa gggagtagtg
3841 tcactgcttg ttatgcatca tttcaggagt tactggattt gttgttcttt cagaaagctt
3901 tgaatactaa attatagtgt agaaaagaac tggaaaccag gaactctgga gttcatcaga
3961 gttatggtgc cgaattgtct ttggtgcttt tcacttgtgt tttaaaataa ggatttttct
4021 cttatttctc cccctagttt gtgagaaaca tctcaataaa gtgctttaaa aagaaaaaaa
4081 aaaaaaaaa
//