LOCUS BC028369 3992 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens fem-1 homolog c (C. elegans), mRNA (cDNA clone
MGC:26985 IMAGE:4826273), complete cds.
ACCESSION BC028369
VERSION BC028369.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3992)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3992)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC028369.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: n Column: 17.
FEATURES Location/Qualifiers
source 1..3992
/db_xref="H-InvDB:HIT000050944"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26985 IMAGE:4826273"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3992
/gene="FEM1C"
/gene_synonym="EUROIMAGE686608"
/gene_synonym="EUROIMAGE783647"
/gene_synonym="FEM1A"
/gene_synonym="KIAA1785"
/db_xref="GeneID:56929"
/db_xref="HGNC:HGNC:16933"
/db_xref="MIM:608767"
CDS 565..2418
/gene="FEM1C"
/gene_synonym="EUROIMAGE686608"
/gene_synonym="EUROIMAGE783647"
/gene_synonym="FEM1A"
/gene_synonym="KIAA1785"
/codon_start=1
/product="fem-1 homolog c (C. elegans)"
/protein_id="AAH28369.1"
/db_xref="GeneID:56929"
/db_xref="HGNC:HGNC:16933"
/db_xref="MIM:608767"
/translation="MDLKTAVFNAARDGKLRLLTKLLASKSKEEVSSLISEKTNGATP
LLMAARYGHLDMVEFLLEQCSASIEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSL
LNHGASVNNTTLTNSTPLRAACFDGHLEIVKYLVEHKADLEVSNRHGHTCLMISCYKG
HKEIAQYLLEKGADVNRKSVKGNTALHDCAESGSLDIMKMLLMYCAKMEKDGYGMTPL
LSASVTGHTNIVDFLTHHAQTSKTERINALELLGATFVDKKRDLLGALKYWKKAMNMR
YSDRTNIISKPVPQTLIMAYDYAKEVNSAEELEGLIADPDEMRMQALLIRERILGPSH
PDTSYYIRYRGAVYADSGNFKRCINLWKYALDMQQSNLDPLSPMTASSLLSFAELFSF
MLQDRAKGLLGTTVTFDDLMGILCKSVLEIERAIKQTQCPADPLQLNKALSIILHLIC
LLEKVPCTLEQDHFKKQTIYRFLKLHPRGKNNFSPLHLAVDKNTTCVGRYPVCKFPSL
QVTAILIECGADVNVRDSDDNSPLHIAALNNHPDIMNLLIKSGAHFDATNLHKQTASD
LLDEKEIAKNLIQPINHTTLQCLAARVIVNHRIYYKGHIPEKLETFVSLHR"
BASE COUNT 1096 a 824 c 840 g 1232 t
ORIGIN
1 gtccgccccg cgcctaggct gttgctggcc gcggccgccg ccctcccccg gcccaatggc
61 gtggcggcac agtcagtgat gtgacgctca ggcttgtccg gcccccggct cgcagcccat
121 tacaccatcc gtcgcagcag tcgctgcagc cgctgcagtc cgagccgact aagggcggga
181 ggcagctcgg gtggcggggc gtggcgaaca gcgcggccgg attcattcct ttggggcgcg
241 gagcatggag gagctgtgcg gccgcaggcg gagcagggcg gcccgggcgg cggtggggac
301 aacggtttcc ctttgaaggg gacggacaaa gcccgagtga ccagcggcgg cggggaggac
361 tagtccccgg gcagtttggt gccctggttg tcagatgttg gaaagcagta ggacggaaca
421 tactcttcgt ggttgtgtat ccgttctggg gtgcagcaat taacattgga ctttggttcc
481 tgtgactctt gcctgtgtcg atagagttaa actggagctc tgctttgaaa gataaataaa
541 gcacagcctc tcaactggac ataaatggat ctaaagacag cagtatttaa cgcagctcgg
601 gatggcaaac tccggcttct caccaaattg ttggcaagca aatccaaaga ggaggtttcc
661 tccttgatct ctgaaaaaac aaatggggcc acgccactct tgatggccgc caggtatggg
721 caccttgaca tggtggaatt cctcctagag caatgcagtg cctccataga agttgggggc
781 tccgtcaatt ttgatggcga aaccattgag ggggctcccc ctttatgggc cgcttctgca
841 gcaggacatc tgaaggtggt ccagtccttg ttaaatcatg gagcatctgt caacaacacg
901 actttaacca attcaactcc tcttcgagct gcgtgtttcg atggccattt ggaaatagtg
961 aagtaccttg tagaacacaa agctgatttg gaagtgtcaa accgacatgg gcatacgtgc
1021 ttgatgattt catgttacaa aggacataaa gagattgctc agtatttact tgaaaagggg
1081 gcagatgtta atagaaaaag tgtcaaaggt aatactgcat tgcatgattg tgcagaatct
1141 ggaagtttgg acatcatgaa gatgcttctt atgtattgtg ccaagatgga aaaggatggt
1201 tatggaatga ctccccttct ctcagcaagt gtgactggtc acacaaatat tgtggatttt
1261 ctgacacacc atgcacagac cagcaagaca gaacgtatta atgctctaga gcttctggga
1321 gctacatttg tagacaaaaa aagagatctg cttggggctt tgaaatactg gaaaaaggca
1381 atgaacatga ggtacagtga taggactaat attattagta aaccagtgcc acagacacta
1441 ataatggctt atgattatgc caaggaagtg aacagtgcag aagagctaga aggtcttatt
1501 gctgatcctg atgagatgag aatgcaggca ctattaatca gagaacgtat tcttggtcct
1561 tctcatcctg atacctctta ctatattaga tatagaggcg ctgtctatgc agactctgga
1621 aatttcaaac gatgcatcaa cctatggaag tatgctttgg atatgcagca gagcaatttg
1681 gatcctttaa gcccaatgac agccagcagc ttattatctt ttgcagaact attctccttt
1741 atgctacagg atagggctaa aggcctgctg ggtactactg ttacatttga tgatcttatg
1801 ggcatacttt gcaaaagcgt ccttgaaata gagcgagcta tcaaacaaac tcagtgtcca
1861 gctgacccat tacagttaaa taaggccctt tctattattt tgcacttaat ttgcttgtta
1921 gagaaagttc cttgtactct agaacaagac catttcaaaa agcagactat atacaggttt
1981 cttaagctgc atccaagggg aaagaataac ttcagccctc ttcatctggc tgtggacaag
2041 aatactacat gtgtagggcg gtaccctgtt tgtaaatttc catctctaca agttactgca
2101 atactgatag aatgtggtgc tgatgtgaac gtcagagact cggatgacaa cagtcccctg
2161 catatcgctg ctcttaacaa ccatccagac atcatgaatc tccttattaa atcaggtgca
2221 cattttgatg ccacaaactt gcacaaacaa actgctagtg acttgctgga tgagaaggaa
2281 atagctaaaa atttaatcca gcctataaat cataccacat tgcagtgtct tgctgctcgt
2341 gtcatagtga atcatagaat atattataaa gggcatatcc cagaaaagct agagactttt
2401 gtttcccttc atagatgata acttgactgt attttagcac tgttaaagca cgaattggta
2461 acagttgttt cataaatgag cactgttgtg ataacaccag cattcattta gcttgattga
2521 tatcattgtg ctctcattgg ctaaagcatt ataagcatca aatttacaac attggtttcc
2581 caatatttaa tataaatata ccatataata tattgtttgt gaattattga gaaatgtaac
2641 attcaaattt ctaaaattgt ctgccaaagg cttattcatt ctggttttgt ttgctgttgg
2701 gtgtttgggg cagagttaac catttctcca tggtgtcttt atactttact ggtttgtgaa
2761 ttttatacaa ttggaagtct ttttttcttg cttctttctt ctcttctcaa gtttcccccc
2821 tgtttctact ttattgtttg tcctaaccat ttctactaca gttttttcct tatggaccca
2881 tactaggttg tacaaacctt aaggactcgt taccatttgc agttaccata agtgctttat
2941 cttctctatg cacaggctta aacttgactg ttgtatgtta gcatattttc tatgcagcag
3001 ttggtcaact tcaactcaaa acactgtttt cttatgtttg ttacaaactt aattttttga
3061 aagtactctg tagcatgaca atttttagag ctgcaggtta gctattatag ctcaagcttt
3121 tttgtttgtt tttttcttca ctttcttcac atctgaggtt tctttctcta atccactgaa
3181 attattgtgt gctaaatttg ggaaacagat ctattctaac tcattaaccc agttgaaatt
3241 taggtctgtc atcttaatat atcatgcagt aaaaggaaga atctttttaa agtgacccac
3301 ctttcatgct gttccagcat tgtcctgctt gtgctgatgg tgtgattagg tgtagagaat
3361 ttgcttaaat ttaacttcaa agttcatcac acagcttaat gagtcacatt gaaatactca
3421 gtaattgaac tgcaaatcac ttttagttac aaaagagcta aagcatgtca gtggcatgat
3481 gcttgccaag ccagatctag gcatctagga taattaaggt attttagtat gcaatttact
3541 gccataatat caaaggtcag taacagtgtt ctttctttct tcaagcttat gtataccttt
3601 aaagataact tgcatgaatt actttgatta ctttggtctc aattatttgt caccccagtt
3661 aaacatgaaa ggttgcagtg cttcctgttc ccttactgga agttagcttt ttcttttctc
3721 tttcttcctt tctttctctc actctttctt tctctttctc tttctctctc tctctctctc
3781 tcactcactc actcacagat ttgctaatgc cacagaaagg gctcttttaa cttaagataa
3841 gtgaaaagta ctaaaaaaga ttcaggtaat tatcattcag cactttattg taattcagaa
3901 taaaatttat gatggcatat ttgccctgca aatgtcttaa tgaagttgtt ctcaataaaa
3961 agctccttat tgatttgaaa aaaaaaaaaa aa
//