LOCUS BC028356 2002 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens keratin 23 (histone deacetylase inducible), mRNA (cDNA
clone MGC:26158 IMAGE:4838347), complete cds.
ACCESSION BC028356
VERSION BC028356.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2002)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2002)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC028356.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894338.
FEATURES Location/Qualifiers
source 1..2002
/db_xref="H-InvDB:HIT000040532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26158 IMAGE:4838347"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2002
/gene="KRT23"
/gene_synonym="CK23"
/gene_synonym="DKFZP434G032"
/gene_synonym="HAIK1"
/gene_synonym="K23"
/gene_synonym="MGC26158"
/db_xref="GeneID:25984"
/db_xref="HGNC:HGNC:6438"
/db_xref="MIM:606194"
CDS 429..1697
/gene="KRT23"
/gene_synonym="CK23"
/gene_synonym="DKFZP434G032"
/gene_synonym="HAIK1"
/gene_synonym="K23"
/gene_synonym="MGC26158"
/codon_start=1
/product="keratin 23 (histone deacetylase inducible)"
/protein_id="AAH28356.1"
/db_xref="GeneID:25984"
/db_xref="HGNC:HGNC:6438"
/db_xref="MIM:606194"
/translation="MNSGHSFSQTPSASFHGAGGGWGRPRSFPRAPTVHGGAGGARIS
LSFTTRSCPPPGGSWGSGRSSPLLGGNGKATMQNLNDRLASYVEKVRALEEANMKLES
RILKWHQQRDPGSKKDYSQYEENITHLQEQIVDGKMTNAQIILLIDNARMAVDDFNLK
YENEHSFKKDLEIEVEGLRRTLDNLTIVTTDLEQEVEGMRKELILMKKHHEQEMEKHH
VPSDFNVNVKVDTGPREDLIKVLEDMRQEYELIIKKKHRDLDTWYKEQSAAMSQEAAS
PATVQSRQGDIHELKRTFQALEIDLQTQYSTKSALENMLSETQSRYSCKLQDMQEIIS
HYEEELTQLRHELERQNNEYQVLLGIKTHLEKEITTYRRLLEGESEGTREESKSSMKV
FATPKIKAITQETINGRLVLCQVNEIQKHA"
BASE COUNT 604 a 479 c 520 g 399 t
ORIGIN
1 agggggaaat cctgagcgca ggccagggtt gtttggtttt gaggtgtgct gggatgaaag
61 gcaccctgga agtggaaggt aaatgagcaa tggaaaaact tcacggcaag attagaaaga
121 tacctgagcc caatacccgc ctgatgtcgt gggccacacc tccgggttac caggggaagg
181 gaggaagcaa actgtcatat tgatgtggct ctaaacaaca acagtgtgcg aaggcccagg
241 ggcactttgg gattgaccaa gaggaaacac aagttgcaca atgatacaat cttgttggta
301 caattgtcag agaagggaac tcccacagca aaggccataa aaccatccag ggcagtctgg
361 ggcggctcag ttctgcggtg ccagggagtg gagcagagct cagccccgtc ccaaacacag
421 atgggaccat gaactccgga cacagcttca gccagacccc ctcggcctcc ttccatggcg
481 ccggaggtgg ctggggccgg cccaggagct tccccagggc tcccaccgtc catggcggtg
541 cggggggagc ccgcatctcc ctgtccttca ccacgcggag ctgcccaccc cctggagggt
601 cttggggttc tggaagaagc agccccctac taggcggaaa tgggaaggcc accatgcaga
661 atctcaacga ccgcctggcc tcctacgtgg agaaggttcg cgccctggag gaggccaaca
721 tgaagctgga aagccgcatc ctgaaatggc accagcagag agatcctggc agtaagaaag
781 attattcaca gtatgaggaa aacatcacac acctgcagga gcagatagtg gatggtaaga
841 tgaccaatgc tcagattatt cttctcattg acaatgccag gatggcagtg gatgacttca
901 acctcaagta tgaaaatgaa cactccttta agaaagactt ggaaattgaa gtcgagggcc
961 tccgaaggac cttagacaac ctgaccattg tcacaacaga cctagaacag gaggtggaag
1021 gaatgaggaa agagctcatt ctcatgaaga agcaccatga gcaggaaatg gagaagcatc
1081 atgtgccaag tgacttcaat gtcaatgtga aggtggatac gggtcccagg gaagatctga
1141 ttaaggtcct ggaggatatg agacaagaat atgagcttat aataaagaag aagcatcgag
1201 acttggacac ttggtataaa gaacagtctg cagccatgtc ccaggaggca gccagtccag
1261 ccactgtgca gagcagacaa ggtgacatcc acgaactgaa gcgcacattc caggccctgg
1321 agattgacct gcagacacag tacagcacga aatctgcttt ggaaaacatg ttatccgaga
1381 cccagtctcg gtactcctgc aagctccagg acatgcaaga gatcatctcc cactatgagg
1441 aggaactgac gcagctacgc catgaactgg agcggcagaa caatgaatac caagtgctgc
1501 tgggcatcaa aacccacctg gagaaggaaa tcaccacgta ccgacggctc ctggagggag
1561 agagtgaagg gacacgggaa gaatcaaagt cgagcatgaa agtgtttgca actccaaaga
1621 tcaaggccat aacccaggag accatcaacg gaagattagt tctttgtcaa gtgaatgaaa
1681 tccaaaagca cgcatgagac caatgaaagt ttccgcctgt tgtaaaatct attttccccc
1741 aaggaaagtc cttgcacaga caccagtgag tgagttctaa aagataccct tggaattatc
1801 agactcagaa acttttattt tttttttctg taactgtctc accagacttc tcataatgct
1861 cttaatatat tgcacttttc taatcaaagt gcgagtttat gagggtaaag ctctactttc
1921 ctactgcagc cttcagattc tcatcatttt gcatctattt tgtagccaat aaaactccgc
1981 actagcaaaa aaaaaaaaaa aa
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