LOCUS BC028351 2967 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens hydrocephalus inducing homolog (mouse), mRNA (cDNA
clone IMAGE:4837075), partial cds.
ACCESSION BC028351
VERSION BC028351.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2967)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2967)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46361982.
FEATURES Location/Qualifiers
source 1..2967
/db_xref="H-InvDB:HIT000040527"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4837075"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2967
/gene="HYDIN"
/gene_synonym="DKFZp434D0513"
/gene_synonym="DKFZp434L0850"
/gene_synonym="FLJ12871"
/gene_synonym="FLJ14665"
/gene_synonym="KIAA1864"
/db_xref="GeneID:54768"
/db_xref="HGNC:HGNC:19368"
CDS <1..2192
/gene="HYDIN"
/gene_synonym="DKFZp434D0513"
/gene_synonym="DKFZp434L0850"
/gene_synonym="FLJ12871"
/gene_synonym="FLJ14665"
/gene_synonym="KIAA1864"
/codon_start=3
/product="HYDIN protein"
/protein_id="AAH28351.2"
/db_xref="GeneID:54768"
/db_xref="HGNC:HGNC:19368"
/translation="RGRRMESAGGFKLGEKKKLLKMTSRRLEESMGAVQMGLVNMFKG
FQSKVLPPLSPKVVTEEEVNRMLTPSEFLKEMSLTTEQRLAKTRLMCRPQIIELLDMG
ETTHQKFSGIDLDQALFQPFPSEIIFQNYTPCEVYEVPLILRNNDKIPRLVKVVEESS
PYFKVISPKDIGHKVAPGVPSIFRILFTPEENKDYAHTLTCVTEREKFIVPIKARGAR
AILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIEPAIGTLNVGES
MQLEVEFEPQSVGDHSGRLIVCYDTGEKVFVSLYGAAIDMNIRLDKNSLTIEKTYISM
ANQRTITIHNRSNIIAHFLWKVFATQQEEDREKYRACDDLIKEEKDETDEFFEECITD
PLLREHLSVLSRTFANQRRLVQGDSKLFFNNVFTVEPLEGDVWPNSSAEITVYFNPLE
AKLYQQTIYCDILGREIRLPLRIKGEGMGPKIHFNFELLDIGKVFTGSAHCYEAILYN
KGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIILGNFEEEFLVNV
NGSPEPVKLTIRGCVIGPTFHFNVPALHFGDVSFGFPHTLICSLNNTSLIPMTYKLRI
PGDGLGHKSISYCEQHVDYKRPSWTKEEISSMKPKEFTISPDCGTIRPQGFAAIRVTL
CSNTVQKYELALVVDVEGIGEEVLALLITARYCSPACSSPESPPSLQ"
BASE COUNT 853 a 652 c 691 g 771 t
ORIGIN
1 agcgggggag gcgcatggag agtgcgggcg gcttcaagct gggtgagaaa aaaaaattac
61 taaaaatgac aagtagaaga cttgaggagt ccatgggggc tgttcagatg ggattggtca
121 atatgttcaa aggatttcaa agcaaggttt tgccacccct gagtccaaag gtggttacag
181 aagaagaagt aaaccgaatg cttacaccct cagagttcct gaaggaaatg tccctgacca
241 ccgagcagag actggcaaaa acacgtttga tgtgccgacc acagatcatc gaactcttag
301 atatggggga aacaacacat cagaagtttt caggaattga cctggatcag gcattattcc
361 agccctttcc atcagaaatt atatttcaga actacactcc ctgtgaagtc tatgaagttc
421 cactgatttt gaggaacaat gacaaaattc caaggttggt gaaagttgtg gaagaaagtt
481 cgccttactt taaagtaatc agccccaaag atattggcca caaagtggct cctggagtgc
541 cttccatatt ccgaatcctc tttactccag aggagaacaa ggattacgcc catacgttga
601 cctgtgttac tgaaagagaa aagtttattg tacccatcaa agctagaggg gcacgagcca
661 ttctcgattt tcctgacaag ctgaattttt ccacttgtcc tgtcaaatac agcacccaga
721 agattctgct ggtacgaaac attggcaaca aaaatgctgt atttcacatc aaaacttgta
781 ggcctttctc tatagaacca gctattggaa ctcttaatgt gggagagtcc atgcaactgg
841 aagtggagtt tgagccacag agtgtgggcg atcacagtgg aagacttatc gtgtgttatg
901 acacaggtga aaaggtgttt gtatctctct atggagctgc catagacatg aatataaggc
961 tggataagaa ttccttgacc atcgagaaaa cctacatatc tatggccaat cagcgaacta
1021 taaccattca caatcgcagt aatatcattg cccatttcct gtggaaggta tttgctaccc
1081 agcaagaaga ggacagagaa aaatataggg cctgtgatga tctgatcaaa gaggagaagg
1141 atgagactga tgagtttttt gaagagtgca ttactgatcc tttactccga gaacatcttt
1201 ctgttctgtc ccgaaccttt gcgaatcaga ggaggctggt gcagggagac agcaagctgt
1261 tcttcaataa cgttttcact gtggagcccc tggaaggtga tgtctggccc aactcatcag
1321 ctgaaatcac cgtgtacttt aacccactag aagccaagct ctatcaacag accatttact
1381 gcgacatttt aggccgagaa atccgtctgc ccctccgaat caaaggggaa ggcatgggac
1441 ctaagattca cttcaacttt gaattgctgg atattgggaa agttttcact ggatctgcac
1501 attgttatga ggcgatactg tacaacaaag gcagcatcga tgctctcttc aacatgaccc
1561 ctccaacttc agctttgggg gcctgctttg ttttcagtcc caaggaaggc atcattgaac
1621 caagtggagt ccaagctatc cagatctcct tcagctctat catcctggga aactttgaag
1681 aagagttcct ggtcaatgtc aatgggtcac ctgagcctgt gaaactgacc attagaggct
1741 gtgtcattgg acctaccttc cattttaatg ttccagctct gcactttggt gatgtttcct
1801 ttgggtttcc tcataccttg atatgttccc tcaataatac ctctttgatc cccatgactt
1861 acaaactgcg tatccctggg gatggccttg gccataaaag catttcatat tgtgagcagc
1921 atgtggacta caaaagacca tcttggacca aggaagaaat atcctcaatg aaaccaaaag
1981 aattcaccat ctctcctgac tgtggcacca ttcgccccca gggatttgct gctatcaggg
2041 tgacattatg ctccaacact gtgcagaaat acgagctggc actcgtggtg gacgtggagg
2101 gcatcggaga agaggtgctg gcgctcttaa ttacagcaag gtattgctcc ccagcttgct
2161 cttctcctga gtcgcccccg agcctccagt aatgggctgc ctcccagaag gcagctggcc
2221 tgccaaccca agcacactga gtttgtcctg ccttcctggg aagggaagtt gaatctgaca
2281 ttcaaatgac aaagcagcaa atgtttctaa agcacctttg gtggagataa gaagaagtgt
2341 gtgtgttttg tagagtttag gcagagaatc ctaagaatag tgaaaaaacg ggtcagaccc
2401 tctctaacgg gtttgacttt caaagtatgt aaccagaaag gttttagcag gaagaggtga
2461 agagctgctc atttttattt tcatctttca acatggtgct ccagagttat gcaataggaa
2521 ggtgatgctg tcagtcctgc agtggaagat ccatagagcc aagaggtccc tgccccggga
2581 cactgttgct gtgacttgaa tttcaggcta ggaatgggcc cccaagatga ggctcatctt
2641 taacaaggta tactcctcag aaccatctcc aactcctctc tctttttgag agaggcagct
2701 gggttaaaat cctggctcag ccatttgttg actgtgtcct tttgaccaag ctacagtcat
2761 tgcagtactg ctgatgaggg tggtggtgtc atcgactaat gatgatgtga tcccaaataa
2821 aatcctgggg ccacactctt cccaaagcaa tcagtgtcca gatctgggac tttaagttgt
2881 atgtatgcaa atgctatgta taggaaatag agaaaatgac ttaggaaaac tgataatcat
2941 gctaatatgc caaaaaaaaa aaaaaaa
//