LOCUS BC028295 1908 bp mRNA linear HUM 08-MAR-2005
DEFINITION Homo sapiens peptidase D, mRNA (cDNA clone MGC:24893
IMAGE:4470066), complete cds.
ACCESSION BC028295
VERSION BC028295.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1908)
AUTHORS Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1908)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (10-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557834.
FEATURES Location/Qualifiers
source 1..1908
/db_xref="H-InvDB:HIT000040513"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24893 IMAGE:4470066"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1908
/gene="PEPD"
/gene_synonym="MGC10905"
/gene_synonym="PROLIDASE"
/db_xref="GeneID:5184"
/db_xref="MIM:170100"
CDS 6..1487
/gene="PEPD"
/gene_synonym="MGC10905"
/gene_synonym="PROLIDASE"
/codon_start=1
/product="PEPD protein"
/protein_id="AAH28295.1"
/db_xref="GeneID:5184"
/db_xref="MIM:170100"
/translation="MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGS
IVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPA
SHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCRE
ASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMK
EYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFD
MGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLAD
RIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEP
GLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVR
IEEDVVVTDSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGPK"
BASE COUNT 421 a 538 c 537 g 412 t
ORIGIN
1 cgaacatggc ggcggccacc ggaccctcgt tttggctggg gaatgaaacc ctgaaggtgc
61 cgctggcgct ctttgccttg aaccggcagc gcctgtgtga gcggctgcgg aagaaccctg
121 ctgtgcaggc cggctccatc gtggtcctgc agggcgggga ggagactcag cgctactgca
181 ccgacaccgg ggtcctcttc cgccaggagt ccttctttca ctgggcgttc ggtgtcactg
241 agccaggctg ctatggtgtc atcgatgttg acactgggaa gtcgaccctg tttgtgccca
301 ggcttcctgc cagccatgcc acctggatgg gaaagatcca ttccaaggag cacttcaagg
361 agaagtatgc cgtggacgac gtccagtacg tagatgagat tgccagcgtc ctgacgtcac
421 agaagccctc tgtcctcctc actttgcgtg gcgtcaacac ggacagcggc agtgtctgca
481 gggaggcctc ctttgacggc atcagcaagt tcgaagtcaa caataccatt cttcacccag
541 agatcgttga gtgccgagtg tttaagacgg atatggagct ggaggttctg cgctatacca
601 ataaaatctc cagcgaggcc caccgtgagg taatgaaggc tgtaaaagtg ggaatgaaag
661 aatatgagtt ggaaagcctc ttcgagcact actgctactc ccggggcggc atgcgccaca
721 gctcctacac ctgcatctgc ggcagtggtg agaactcagc cgtgctacac tacggacacg
781 ccggagctcc caacgaccga acgatccaga atggggatat gtgcctgttc gacatgggcg
841 gtgagtatta ctgcttcgct tccgacatca cctgctcctt tcccgccaac ggcaagttca
901 ctgcagacca gaaggccgtc tatgaggcag tgctgcggag ctcccgtgcc gtcatgggtg
961 ccatgaagcc aggtgtctgg tggcctgaca tgcaccgcct ggctgaccgc atccacctgg
1021 aggagctggc ccacatgggc atcctgagcg gcagcgtgga cgccatggtc caggctcacc
1081 tgggggccgt gtttatgcct cacgggcttg gccacttcct gggcattgac gtgcacgacg
1141 tgggaggcta cccagagggc gtggagcgca tcgacgagcc cggcctgcgg agcctgcgca
1201 ctgcacggca cctgcagcca ggcatggtgc tcaccgtgga gccgggcatc tacttcatcg
1261 accacctcct ggatgaggcc ctggcggacc cggcccgcgc ctccttcttt aaccgcgagg
1321 tcctgcagcg ctttcgcggt tttggcgggg tccgcatcga ggaggacgtc gtggtgactg
1381 acagcggcat agagctgctg acctgcgtgc cccgcactgt ggaagagatt gaagcatgca
1441 tggcaggctg tgacaaggcc tttaccccct tctctggccc caagtagagc cagccagaaa
1501 tcccagcgca cctgggggcc tggccttgca acctctttcc gtgatgggca gcctgctggt
1561 cagcactcca gtagcgagag acggcaccca gaatcagatc ccagcttcgg catttgatca
1621 gaccaaacag tgctgtttcc cggggaggaa acactttttt aattaccctt ttgcaggctc
1681 ccacctttaa tctgtttcat accttgctta ttaaatgagc gacttaaaat gattgaaaat
1741 aatgctgttc tttagtagca actaaaatgt gtcttgctgt catttatatt ccttttccca
1801 ggaaagaagc atttctgata ctttactttc tgtcaaaaat caatatgcag aatggcattt
1861 gcaataaaag gtttcctaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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