LOCUS BC028226 1717 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens neurogenin 1, mRNA (cDNA clone MGC:40048
IMAGE:5241507), complete cds.
ACCESSION BC028226
VERSION BC028226.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1717)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1717)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: l Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1717
/db_xref="H-InvDB:HIT000040500"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40048 IMAGE:5241507"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1717
/gene="NEUROG1"
/gene_synonym="AKA"
/gene_synonym="Math4C"
/gene_synonym="ngn1"
/db_xref="GeneID:4762"
/db_xref="HGNC:HGNC:7764"
/db_xref="MIM:601726"
CDS 260..973
/gene="NEUROG1"
/gene_synonym="AKA"
/gene_synonym="Math4C"
/gene_synonym="ngn1"
/codon_start=1
/product="neurogenin 1"
/protein_id="AAH28226.1"
/db_xref="GeneID:4762"
/db_xref="HGNC:HGNC:7764"
/db_xref="MIM:601726"
/translation="MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGP
PAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRER
NRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGA
RERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDPVFS
FPSLPKDLLHTTPCFIPYH"
BASE COUNT 395 a 561 c 443 g 318 t
ORIGIN
1 cacacgagct gatctgatcg ccggcgacat cactcaggag accggccggg cgcgtggccc
61 ctgcaggcga ggcgaggagg ccaggccaag ttctccgtgc gcccctgcac ccttccaggc
121 tctcgcaccc gcaactggca cagagtaaca accccaggct gttgggaacg taagtgcgcc
181 ctggcggctc tgccctcagt ccgggctgca gcgctctgag cgcctttcta tctgtccgtc
241 ggtcctgcac agcgcaacga tgccagcccg ccttgagacc tgcatctccg acctcgactg
301 cgccagcagc agcggcagtg acctatccgg cttcctcacc gacgaggaag actgtgccag
361 actccaacag gcagcctccg cttcggggcc gcccgcgccg gcccgcaggg gcgcgcccaa
421 tatctcccgg gcgtctgagg ttccaggggc acaggacgac gagcaggaga ggcggcggcg
481 ccgcggccgg acgcgggtcc gctccgaggc gctgctgcac tcgctgcgca ggagccggcg
541 cgtcaaggcc aacgatcgcg agcgcaaccg catgcacaac ttgaacgcgg ccctggacgc
601 actgcgcagc gtgctgccct cgttccccga cgacaccaag ctcaccaaaa tcgagacgct
661 gcgcttcgcc tacaactaca tctgggctct ggccgagaca ctgcgcctgg cggatcaagg
721 gctgcccgga ggcggtgccc gggagcgcct cctgccgccg cagtgcgtcc cctgcctgcc
781 cggtccccca agccccgcca gcgacgcgga gtcctggggc tcaggtgccg ccgccgcctc
841 cccgctctct gaccccagta gcccagccgc ctccgaagac ttcacctacc gccccggcga
901 ccctgttttc tccttcccaa gcctgcccaa agacttgctc cacacaacgc cctgtttcat
961 tccttaccac taggcccttt gtagacactg ttactttccc cctcccctag tcagcaggca
1021 atagatgggg ccccagctgc cgcctcggga ccccctctcc aggcggaggg aggaagcggg
1081 agctttaaag cagtcgggga tacctgagcc gcttgttagg tcgccgcacc ctcgcggcgg
1141 atgtctcttg gtctgtttct ccggccctca gcccagcgcc cctcctgccc gcccctagac
1201 ggcctttcct tttgcacttt ctgaactcca caaaacctcc tttgtgactg gctcagaact
1261 gaccccagcc accacttcag tgtgatttag aaaagggaca gatcagcccc tgaagacgag
1321 gtgaaaagtc aattttacaa tttgtagaac tctaatgaag aaaaacgagc atgaaaattc
1381 ggtttgagcc ggctgacaat acaatgaaaa ggcttaaaaa gcagagacaa ggagtgggct
1441 tcatgcatta tggatcccga cccccaccac tgcagactcg ctctaggaag aactggagac
1501 tcttgcttag ctattcaggc acagggctgg agagtacttt aatttattca agatgcttca
1561 ttcatatgaa aatgtatttt tgtacataaa gagtttattc tattatgagc tatcaaagtt
1621 tacatttttg tactgcagac gcttcatgta aataaaaact aaaaataaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//