LOCUS BC028157 1791 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polymerase (RNA) II (DNA directed) polypeptide C,
33kDa, mRNA (cDNA clone MGC:40083 IMAGE:5240953), complete cds.
ACCESSION BC028157
VERSION BC028157.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1791)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1791)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: l Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1791
/db_xref="H-InvDB:HIT000040468"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40083 IMAGE:5240953"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1791
/gene="POLR2C"
/gene_synonym="hRPB33"
/gene_synonym="hsRPB3"
/gene_synonym="RPB3"
/gene_synonym="RPB31"
/db_xref="GeneID:5432"
/db_xref="HGNC:HGNC:9189"
/db_xref="MIM:180663"
CDS 43..870
/gene="POLR2C"
/gene_synonym="hRPB33"
/gene_synonym="hsRPB3"
/gene_synonym="RPB3"
/gene_synonym="RPB31"
/codon_start=1
/product="polymerase (RNA) II (DNA directed) polypeptide
C, 33kDa"
/protein_id="AAH28157.1"
/db_xref="GeneID:5432"
/db_xref="HGNC:HGNC:9189"
/db_xref="MIM:180663"
/translation="MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPI
IAIDWVQIDANSSVLHDEFIAHRLGLIPLISDDIVDKLQYSRDCTCEEFCPECSVEFT
LDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELR
LRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQA
PYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN"
BASE COUNT 468 a 441 c 451 g 431 t
ORIGIN
1 tcaccgcgga gcagacgcgg aggctggtgg cccctgggcg agatgccgta cgccaaccag
61 cctaccgtgc ggatcacgga gctcactgac gagaatgtca agttcatcat cgagaacacc
121 gacctggcgg tggccaattc gattcggagg gtcttcatcg ctgaggttcc cataatagcc
181 attgactggg ttcagattga tgccaattcc tcagtccttc atgatgaatt cattgctcac
241 aggcttggat taattcccct cattagtgat gacattgtgg acaagctgca gtactctcgg
301 gactgcacat gtgaggagtt ctgccccgag tgctcggtgg agttcaccct cgatgtgcgg
361 tgcaatgaag accagacgcg acatgtcacg tctcgagacc tcatctccaa cagcccccgg
421 gtcattccgg tgacatcccg gaaccgagat aatgacccca atgactacgt ggagcaggat
481 gacatcctca tcgtcaagtt gagaaagggc caggagctga gacttcgagc ctatgccaaa
541 aagggctttg gcaaggagca tgccaagtgg aaccctactg caggggtggc ttttgaatac
601 gatccagaca atgccctgag gcacacagtg taccccaagc ccgaggaatg gccaaagagt
661 gagtactcgg agctggatga ggatgagtcg caggctccct atgaccccaa cggcaagcca
721 gaaaggtttt actacaatgt ggagtcctgt ggctctctgc gtcctgaaac cattgtcctg
781 tcagccctct caggattgaa gaagaaactg agtgatttac aaactcaatt aagccacgag
841 atccagagtg atgtgctaac cataaattaa ctgcagcttg cctgcttcag caaaaacgga
901 gattcaggcc agcagctgga tatgggggtc tctcttcaga ctcttctcgt ttctgagaat
961 ctagtctact gttggttgag cttcttggca ggacatcagt accaactaga agtgggtcat
1021 agatagatta ccagggatgc agtggtgttt aggcaggata ggtctttact ggccctgact
1081 gctgttaata attggcagca gtgctcccca gatcccagaa ggtccctgct ggagtgtttc
1141 cagtgcacct gtagggaacc aactagactt ctctcctggt tagtccagct ctttactcta
1201 aaccctttct gtccaaaatg agtcattttc agttgtacct tagatgtctg gtgttgagga
1261 tcaagtgcca tagcctttat tcagggggcc tataaaccct tccagttctt gccccagggc
1321 tggcctgcta gcgcttcaaa ttcccaggtg tccctaattt gagaagtaac cttttggaat
1381 agcattagac cctggctgtc ccctccccac caaataaaca tgatatttca ttctctgtcc
1441 agcagtcatg aaccccttca cctccaatga cctgatcatt tagtttggtg ggggtggggg
1501 tgggggtggg ggtgggggtg gaagcagccg caggagcaag ggcccctccc acatacacag
1561 gaggagtatt tcatttctcc ttaatgaagg ctctggccct aacccctcag cactgtctcc
1621 agataggaac atgcacaaag cagttaatta ggcagcctgg agaaaaccag agatccagta
1681 cagaaaggaa aggatattta ttgattaaca gaagttgtct ttttaaaagt gtttattttt
1741 ggcaataaag agcacaacat aatctcaaaa aaaaaaaaaa aaaaaaaaaa a
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