LOCUS BC028102 2382 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cytochrome P450, family 4, subfamily X, polypeptide 1,
mRNA (cDNA clone MGC:40051 IMAGE:5243005), complete cds.
ACCESSION BC028102
VERSION BC028102.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2382)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2382)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29837647.
FEATURES Location/Qualifiers
source 1..2382
/db_xref="H-InvDB:HIT000040442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40051 IMAGE:5243005"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2382
/gene="CYP4X1"
/gene_synonym="MGC40051"
/db_xref="GeneID:260293"
/db_xref="HGNC:HGNC:20244"
CDS 251..1780
/gene="CYP4X1"
/gene_synonym="MGC40051"
/codon_start=1
/product="cytochrome P450, family 4, subfamily X,
polypeptide 1"
/protein_id="AAH28102.1"
/db_xref="GeneID:260293"
/db_xref="HGNC:HGNC:20244"
/translation="MEFSWLETRWARPFYLAFVFCLALGLLQAIKLYLRRQRLLRDLR
PFPAPPTHWFLGHQKFIQDDNMEKLEEIIEKYPRAFPFWIGPFQAFFCIYDPDYAKTL
LSRTDPKSQYLQKFSPPLLGKGLAALDGPKWFQHRRLLTPGFHFNILKAYIEVMAHSV
KMMLDKWEKICSTQDTSVEVYEHINSMSLDIIMKCAFSKETNCQTNSTHDPYAKAIFE
LSKIIFHRLYSLLYHSDIIFKLSPQGYRFQKLSRVLNQYTDTIIQERKKSLQAGVKQD
NTPKRKYQDFLDIVLSAKDESGSSFSDIDVHSEVSTFLLAGHDTLAASISWILYCLAL
NPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPL
TFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDPLRFSQENSDQRHPYAYLPFSAG
SRNCIGQEFAMIELKVTIALILLHFRVTPDPTRPLTFPNHFILKPKNGMYLHLKKLSE
C"
BASE COUNT 634 a 585 c 531 g 632 t
ORIGIN
1 caaaagcagt tgggccgaac gaagcgtgcg cgctttggta accggctaga aatcccgcac
61 gcgcgcctgc ctcctctccc caggcctgag ctgcccctcc cactgccttt ccttcttccc
121 gcgagtcaga agcttcgcga gggcccagag aggcggtggg gtgggcgacc ctacgccagc
181 tccgggcggg agaaagccca ccctctcccg cgccccagga aaccgccggc gttcggcgct
241 gcgcagagcc atggaattct cctggctgga gacgcgctgg gcgcggccct tttacctggc
301 gttcgtgttc tgcctggccc tggggctgct gcaggccatt aagctgtacc tgcggaggca
361 gcggctgctg cgggacctgc gccccttccc agcgcccccc acccactggt tccttgggca
421 ccagaagttt attcaggatg ataacatgga gaagcttgag gaaattattg aaaaataccc
481 tcgtgccttc cctttctgga ttgggccctt tcaggcattt ttctgtatct atgacccaga
541 ctatgcaaag acacttctga gcagaacaga tcccaagtcc cagtacctgc agaaattctc
601 acctccactt cttggaaaag gactagcggc tctagacgga cccaagtggt tccagcatcg
661 tcgcctacta actcctggat tccattttaa catcctgaaa gcatacattg aggtgatggc
721 tcattctgtg aaaatgatgc tggataagtg ggagaagatt tgcagcactc aggacacaag
781 cgtggaggtc tatgagcaca tcaactcgat gtctctggat ataatcatga aatgcgcttt
841 cagcaaggag accaactgcc agacaaacag cacccatgat ccttatgcaa aagccatatt
901 tgaactcagc aaaatcatat ttcaccgctt gtacagtttg ttgtatcaca gtgacataat
961 tttcaaactc agccctcagg gctaccgctt ccagaagtta agccgagtgt tgaatcagta
1021 cacagataca ataatccagg aaagaaagaa atccctccag gctggggtaa agcaggataa
1081 cactccgaag aggaagtacc aggattttct ggatattgtc ctttctgcca aggatgaaag
1141 tggtagcagc ttctcagata ttgatgtaca ctctgaagtg agcacattcc tgttggcagg
1201 acatgacacc ttggcagcaa gcatctcctg gatcctttac tgcctggctc tgaaccctga
1261 gcatcaagag agatgccggg aggaggtcag gggcatcctg ggggatgggt cttctatcac
1321 ttgggaccag ctgggtgaga tgtcgtacac cacaatgtgc atcaaggaga cgtgccgatt
1381 gattcctgca gtcccgtcca tttccagaga tctcagcaag ccacttacct tcccagatgg
1441 atgcacattg cctgcaggga tcaccgtggt tcttagtatt tggggtcttc accacaaccc
1501 tgctgtctgg aaaaacccaa aggtctttga ccccttgagg ttctctcagg agaattctga
1561 tcagagacac ccctatgcct acttaccatt ctcagctgga tcaaggaact gcattgggca
1621 ggagtttgcc atgattgagt taaaggtaac cattgccttg attctgctcc acttcagagt
1681 gactccagac cccaccaggc ctcttacttt ccccaaccat tttatcctca agcccaagaa
1741 tgggatgtat ttgcacctga agaaactctc tgaatgttag atctcagggt acaatgatta
1801 aacgtacttt gtttttcgaa gttaaattta cagctaatga tccaagcaga tagaaaggga
1861 tcaatgtatg gtgggaggat tggaggttgg tgggataggg gtctctgtga agagatccaa
1921 aatcatttct aggtacacag tgtgtcagct agatctgttt ctatataact ttgggagatt
1981 ttcagatctt ttctgttaaa ctttcactac tattaatgct gtatacacca atagactttc
2041 atatattttc tgttgttttt aaaatagttt tcagaattat gcaagtaata agtgcatgta
2101 tgctcactgt caaaaattcc caacactaga aaatcatgta gaataaaaat tttaaatctc
2161 acttcactta gccgacattc catgccctga ccaatcctac tgcttttcct aaaaacagaa
2221 taatttggtg tgcattcttt cagacttttt cctatacatt ttatatgtag aaatgtagca
2281 atgtatttgt atagatgtga tcattcctat attgttattg atttttttca cttaataaaa
2341 attcacctta ttccttaaaa aaaaaaaaaa aaaaaaaaaa aa
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