LOCUS BC028075 2577 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD93 molecule, mRNA (cDNA clone MGC:39899
IMAGE:5216061), complete cds.
ACCESSION BC028075
VERSION BC028075.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2577)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2577)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: i Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11496985.
FEATURES Location/Qualifiers
source 1..2577
/db_xref="H-InvDB:HIT000040426"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39899 IMAGE:5216061"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2577
/gene="CD93"
/gene_synonym="C1qR(P)"
/gene_synonym="C1qRP"
/gene_synonym="CDw93"
/gene_synonym="dJ737E23.1"
/db_xref="GeneID:22918"
/db_xref="HGNC:HGNC:15855"
/db_xref="MIM:120577"
CDS 128..2086
/gene="CD93"
/gene_synonym="C1qR(P)"
/gene_synonym="C1qRP"
/gene_synonym="CDw93"
/gene_synonym="dJ737E23.1"
/codon_start=1
/product="CD93 molecule"
/protein_id="AAH28075.1"
/db_xref="GeneID:22918"
/db_xref="HGNC:HGNC:15855"
/db_xref="MIM:120577"
/translation="MATSMGLLLLLLLLLTQPGAGTGADTEAVVCVGTACYTAHSGKL
SAAEAQNHCNQNGGNLATVKSKEEAQHVQRVLAQLLRREAALTARMSKFWIGLQREKG
KCLDPSLPLKGFSWVGGGEDTPYSNWHKELRNSCISKRCVSLLLDLSQPLLPSRLPKW
SEGPCGSPGSPGSNIEGFVCKFSFKGMCRPLALGGPGQVTYTTPFQTTSSSLEAVPFA
SAANVACGEGDKDETQSHYFLCKEKAPDVFDWGSSGPLCVSPKYGCNFNNGGCHQDCF
EGGDGSFLCGCRPGFRLLDDLVTCASRNPCSSSPCRGGATCVLGPHGKNYTCRCPQGY
QLDSSQLDCVDVDECQDSPCAQECVNTPGGFRCECWVGYEPGGPGEGACQDVDECALG
RSPCAQGCTNTDGSFHCSCEEGYVLAGEDGTQCQDVDECVGPGGPLCDSLCFNTQGSF
HCGCLPGWVLAPNGVSCTMGPVSLGPPSGPPDEEDKGEKEGSTVPRAATASPTRGPEG
TPKATPTTSRPSLSSDAPITSAPLKMLAPSGSPGVWREPSIHHATAASGPQEPAGGDS
SVATQNNDGTDGQKLLLFYILGTVVAILLLLALALGLLVYRKRRAKREEKKEKKPQNA
ADSYSWVPERAESRAMENQYSPTPGTDC"
BASE COUNT 541 a 759 c 783 g 494 t
ORIGIN
1 cttctctgcg ccggagtggc tgcagctcac ccctcagctc cccttggggc ccagctggga
61 gccgagatag aagctcctgt cgccgctggg cttctcgcct cccgcagagg gccacacaga
121 gaccgggatg gccacctcca tgggcctgct gctgctgctg ctgctgctcc tgacccagcc
181 cggggcgggg acgggagctg acacggaggc ggtggtctgc gtggggaccg cctgctacac
241 ggcccactcg ggcaagctga gcgctgccga ggcccagaac cactgcaacc agaacggggg
301 caacctggcc actgtgaaga gcaaggagga ggcccagcac gtccagcgag tactggccca
361 gctcctgagg cgggaggcag ccctgacggc gaggatgagc aagttctgga ttgggctcca
421 gcgagagaag ggcaagtgcc tggaccctag tctgccgctg aagggcttca gctgggtggg
481 cgggggggag gacacgcctt actctaactg gcacaaggag ctccggaact cgtgcatctc
541 caagcgctgt gtgtctctgc tgctggacct gtcccagccg ctccttccca gccgcctccc
601 caagtggtct gagggcccct gtgggagccc aggctccccc ggaagtaaca ttgagggctt
661 cgtgtgcaag ttcagcttca aaggcatgtg ccggcctctg gccctggggg gcccaggtca
721 ggtgacctac accaccccct tccagaccac cagttcctcc ttggaggctg tgccctttgc
781 ctctgcggcc aatgtagcct gtggggaagg tgacaaggac gagactcaga gtcattattt
841 cctgtgcaag gagaaggccc ccgatgtgtt cgactggggc agctcgggcc ccctctgtgt
901 cagccccaag tatggctgca acttcaacaa tgggggctgc caccaggact gctttgaagg
961 gggggatggc tccttcctct gcggctgccg accaggattc cggctgctgg atgacctggt
1021 gacctgtgcc tctcgaaacc cttgcagctc cagcccatgt cgtggggggg ccacgtgcgt
1081 cctgggaccc catgggaaaa actacacgtg ccgctgcccc caagggtacc agctggactc
1141 gagtcagctg gactgtgtgg acgtggatga atgccaggac tccccctgtg cccaggagtg
1201 tgtcaacacc cctgggggct tccgctgcga atgctgggtt ggctatgagc cgggcggtcc
1261 tggagagggg gcctgtcagg atgtggatga gtgtgctctg ggtcgctcgc cttgcgccca
1321 gggctgcacc aacacagatg gctcatttca ctgctcctgt gaggagggct acgtcctggc
1381 cggggaggac gggactcagt gccaggacgt ggatgagtgt gtgggcccgg ggggccccct
1441 ctgcgacagc ttgtgcttca acacacaagg gtccttccac tgtggctgcc tgccaggctg
1501 ggtgctggcc ccaaatgggg tctcttgcac catggggcct gtgtctctgg gaccaccatc
1561 tgggcccccc gatgaggagg acaaaggaga gaaagaaggg agcaccgtgc cccgtgctgc
1621 aacagccagt cccacaaggg gccccgaggg cacccccaag gctacaccca ccacaagtag
1681 accttcgctg tcatctgacg cccccatcac atctgcccca ctcaagatgc tggcccccag
1741 tgggtcccca ggcgtctgga gggagcccag catccatcac gccacagctg cctctggccc
1801 ccaggagcct gcaggtgggg actcctccgt ggccacacaa aacaacgatg gcactgacgg
1861 gcaaaagctg cttttattct acatcctagg caccgtggtg gccatcctac tcctgctggc
1921 cctggctctg gggctactgg tctatcgcaa gcggagagcg aagagggagg agaagaagga
1981 gaagaagccc cagaatgcgg cagacagtta ctcctgggtt ccagagcgag ctgagagcag
2041 ggccatggag aaccagtaca gtccgacacc tgggacagac tgctgaaagt gaggtggccc
2101 tagagacact agagtcacca gccaccatcc tcagagcttt gaactcccca ttccaaaggg
2161 gcacccacat ttttttgaaa gactggactg gaatcttagc aaacaattgt aagtctcctc
2221 cttaaaggcc ccttggaaca tgcaggtatt ttctacgggt gtttgatgtt cctgaagtgg
2281 aagctgtgtg ttggcgtgcc acggtgggga tttcgtgact ctataatgat tgttactccc
2341 cctccctttt caaattccaa tgtgaccaat tccggatcag ggtgtgagga ggccggggct
2401 aaggggctcc cctgaatatc ttctctgctc acttccacca tctaagagga aaaggtgagt
2461 tgctcatgct gattaggatt gaaatgattt gtttctcttc ctaggatgaa aactaaatca
2521 attaattatt caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//