LOCUS BC028020 2834 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH
domain 2, mRNA (cDNA clone MGC:39939 IMAGE:5218187), complete cds.
ACCESSION BC028020
VERSION BC028020.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2834)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: k Column: 3.
FEATURES Location/Qualifiers
source 1..2834
/db_xref="H-InvDB:HIT000040405"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39939 IMAGE:5218187"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2834
/gene="AGAP2"
/gene_synonym="GGAP2"
/gene_synonym="PIKE"
/db_xref="GeneID:116986"
/db_xref="HGNC:HGNC:16921"
/db_xref="MIM:605476"
CDS 58..2568
/gene="AGAP2"
/gene_synonym="GGAP2"
/gene_synonym="PIKE"
/codon_start=1
/product="ArfGAP with GTPase domain, ankyrin repeat and PH
domain 2"
/protein_id="AAH28020.1"
/db_xref="GeneID:116986"
/db_xref="HGNC:HGNC:16921"
/db_xref="MIM:605476"
/translation="MHAQRQFVVAAVRAEVRRHEVAKQALNRLRKLAERVDDPELQDS
IQASLDSIREAVINSQEWTLSRSIPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTE
SEQYKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQ
LSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLN
VDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAASTPVAGQASNGGHTSDYSSSL
PSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRRTSLFANRRGSDSEKRSLDSRGETT
GSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDL
LRTTVKVPGKRPPRAISAFGPSASINGLVKDMSTVQMGEGLEATTPMPSPSPSPSSLQ
PPPDQTSKHLLKPDRNLARALSTDCTPSGDLSPLSREPPPSPMVKKQRRKKLTTPSKT
EGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQCCESSKVK
LRTDSQSEAVAIQAIRNAKGNSICVDCGAPNPTWASLNLGALICIECSGIHRNLGTHL
SRVRSLDLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPSRDSSREERESWIRAKY
EQLLFLAPLSTSEEPLGRQLWAAVQAQDVATVLLLLAHARHGPLDTSVEDPQLRSPLH
LAAELAHVVITQLLLWYGADVAARDAQGRTALFYARQAGSQLCADILLQHGCPGEGGS
AATTPSAATTPSITATPSPRRRSSAASVGRADAPVALV"
BASE COUNT 627 a 907 c 838 g 462 t
ORIGIN
1 gccatgggcc tcagggccag aggtggttgt tagcctggca agacaggtct gggcaacatg
61 catgcccaga ggcagttcgt tgtagctgca gtgagagcag aagtcagacg acatgaggtg
121 gccaagcagg ctctaaaccg cctcaggaag ctggcagaga gggtggacga ccccgaactc
181 caggacagca tccaggcctc attggacagc attcgagagg ctgtgatcaa tagccaggaa
241 tggactttga gccgctccat tcctgaactg cgcctgggtg tgctgggcga tgccaggagt
301 gggaagtcat cgctcatcca ccgattcctg actggctcat accaggtgct ggagaagaca
361 gagagtgagc agtacaagaa agaaatgttg gtggatggac agacacatct ggtgctaatc
421 cgagaggaag ctggggcacc tgatgccaag ttctcaggct gggcagatgc tgtgatcttc
481 gtcttcagcc tggaggatga gaacagtttc caggctgtga gccgtctcca tgggcagctg
541 agttcccttc gcggggaggg acgaggaggc ctggccttgg cactggtggg gacacaagac
601 aggatcagtg cttcctcccc tcgggtggtg ggagatgctc gtgccagagc tctgtgcgcg
661 gacatgaaac gctgcagcta ctatgagact tgtgcaacct atgggctcaa tgtggatcgg
721 gtcttccagg aggtggccca gaaggtggtg accttgcgca agcagcaaca gcttctggct
781 gcctgcaagt cccttcccag ctccccaagc cactcagctg catccactcc ggtagctggc
841 caggctagta acgggggcca cactagcgac tactcttctt ccctcccgtc ctcaccgaat
901 gttggtcacc gggagctccg agccgaggca gctgcagtgg ctggattgag caccccaggg
961 tccctgcacc gggcagccaa gcgcaggacc agcctttttg cgaatcgtcg gggtagtgac
1021 tccgagaaac gaagcttgga tagtcgggga gagacaacag ggagtgggcg agccatcccc
1081 atcaaacaga gcttcctact aaaacgaagt ggcaattcct tgaacaaaga atggaagaag
1141 aaatatgtaa ccctgtccag taatggcttt ctactctacc accccagtat taacgattac
1201 atccacagta cccacggcaa ggagatggac ttgctgcgaa caacagtcaa agtcccgggc
1261 aagcggcccc cgagggccat ctctgccttt ggcccctcag ccagcattaa cgggctcgtc
1321 aaggacatga gcactgtcca gatgggtgaa ggcctggaag ccactactcc catgccaagc
1381 cctagcccca gccccagttc cctgcagcca ccaccagatc agacatccaa acacctgctg
1441 aagccagacc ggaatttggc ccgagccctc agcacggact gtaccccatc tggagacctg
1501 agccccctga gtcgggaacc ccctccttct cccatggtga agaagcagag gaggaaaaaa
1561 ttgacaacac catccaagac tgaaggctcg gctgggcagg ctgaagagga aaactttgag
1621 ttcctgatcg tgtccagcac gggtcagacg tggcactttg aggcagccag ttttgaggag
1681 cgggatgcct gggtccaggc catcgagagt cagatcctag ccagtctgca atgctgtgag
1741 agcagcaagg tcaagctgcg cacagacagc caaagcgagg ccgtggccat ccaggcgatc
1801 cggaacgcca aggggaattc aatctgcgtg gactgcgggg cccccaaccc cacgtgggcc
1861 agcttgaacc tgggcgccct catctgcatc gagtgttctg gcatccaccg caacctgggc
1921 acacacctgt cccgcgttcg ctcgctggac ttggacgact ggccacggga gctgaccctg
1981 gtgctgacgg ctattggcaa cgacacggcc aaccgcgtgt gggaaagcga cacgcgaggc
2041 cgtgccaagc cctcgcggga ctcttcgcgg gaggagcgcg agtcgtggat tcgcgccaag
2101 tacgagcagc tactgttcct ggcgccgctg agcacctcgg aggagccgct gggccgccag
2161 ctgtgggccg ccgtgcaggc ccaggacgtg gctaccgttc tcctgctttt ggcccatgcg
2221 cgacacgggc cgctcgacac cagcgtagag gacccacagc tgcgctcccc actccacctg
2281 gcggccgagc tcgcccacgt cgtcatcacg caactgctgc tgtggtacgg cgcggacgtg
2341 gcggcccgtg acgcccaggg ccgcacggcg ctgttctacg cccgccaggc tggaagccag
2401 ctgtgcgccg acatccttct ccagcacggc tgcccgggtg agggcggcag cgcggccacc
2461 acgcccagcg cggccaccac gcccagcatc accgccacgc ccagcccccg ccgccggagc
2521 agcgccgcta gcgtgggccg cgccgacgcc ccggttgcgc tggtatagtt gcccagcggg
2581 agagacaccc ccatccccac gcgggccggg cacgaccaca ccgggcggac cgctggacag
2641 acgcacccac tcacctctcc gatccgcacc ccgccccacg ggagcacttc ctacccccac
2701 gagggcacag cccccacgcc ttccagaaga cacaaactca cctccctctc cccaacgagg
2761 catggagacc ccagctcaac acgccccctc tccattgttt ccacaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaaa
//