LOCUS BC028000 1526 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 3 open reading frame 45, mRNA (cDNA clone
MGC:40187 IMAGE:5197901), complete cds.
ACCESSION BC028000
VERSION BC028000.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1526)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1526)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23397472.
FEATURES Location/Qualifiers
source 1..1526
/db_xref="H-InvDB:HIT000040399"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40187 IMAGE:5197901"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1526
/gene="C3orf45"
/gene_synonym="FLJ38608"
/db_xref="GeneID:132228"
/db_xref="HGNC:HGNC:26781"
CDS 28..522
/gene="C3orf45"
/gene_synonym="FLJ38608"
/codon_start=1
/product="chromosome 3 open reading frame 45"
/protein_id="AAH28000.1"
/db_xref="GeneID:132228"
/db_xref="HGNC:HGNC:26781"
/translation="MPSLAPDCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVC
LHQVESISDLHSGAGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLL
ALLVLTCLVLALLAVYLSVLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEA
QAPS"
BASE COUNT 409 a 412 c 413 g 292 t
ORIGIN
1 gctgcatttg tccagtcctg ctactggatg ccatcattgg cccccgactg cccactgctt
61 gccatgcctg aggagaccca agaagactcc gtggcgccaa tgatgcccag ccagaggagc
121 agggggccat tggcccccaa ccacgtgcat gaggtatgcc tgcaccaggt ggagtccatc
181 agcgacctac atagtggagc aggcacactg cgcccctatc taactgaaga ggcacgaccg
241 tgggatgagc tgctgggcgt tttgccgccg tcactgtgtg cccaggctgg ctgcagccct
301 gtgtacagac gaggagggtt cctgctgctg ctcgcgctgc tggtgctcac ttgcctagtg
361 ctcgcactcc tggctgtcta cctgagcgtg ctgcagagtg aatccctgcg catcctggca
421 cacacgctcc gcacgcagga ggagacacta ctcaaactcc gcttggccag cctcagccag
481 cttcggaggc tcaactccag tgaggcccaa gcacccagct gagatgccat ttggatctgg
541 ggcctggggg tgtgtgttgg ggggggaata aagtggctat gggcaggtct ctccttccct
601 actgctggct gccacatcta cactatttcc ttggtgagat ttttgtacaa gaacctgttg
661 ttaacttaat ggctgcctcc ctctcctgat ctcttcaagc caggcctagc caagcctctg
721 gtgccaaagc ctcgctttgg gtggcccaag gtcaggggaa ggggcaccag cctcctggct
781 cctcctgtgg cctgtcaaca ctctctggcc accccagatg gcaggttctg aagtctagaa
841 atagctgccc ccatagcaat cacccaaact ctgccagggc tcccagtgag ggtccagcct
901 cagctcttaa agacaggctg ggctctgagt agggggagag gcaccacctg gggaagactg
961 ccttggaggg caaaggtgac atcgtggaag accagttggg cccaagcctg ggatagtaga
1021 tggggaggga gaacagaaaa atacccaggg gttaagacca cagaaggctg accgttctgt
1081 ttaattatct gtaataatcc ttaaaaatca gcacacaaat ccattccagg tagctttgcc
1141 accccacctg ctgtggtggc atttgtccag atgccaccac ccccctaaga gtgggtcatc
1201 ctgggggagc aaggcctgag aaaggaaagg aagggaaagg ccccctagtg cctgccccac
1261 agccctgagg aaggcacata tttagcctgg cctgagacag gacaggaagg ggccacaggg
1321 ctgagtgcag ggacaaaggg gtcagggtcc caagtgtccg ggcccccagc tacccacccc
1381 atgtctgttt ttggttttgt cattaaaaaa aataaagtga caaatactgg tggaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaa
//