LOCUS BC027972 2666 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens glypican 2, mRNA (cDNA clone MGC:34654 IMAGE:5240315),
complete cds.
ACCESSION BC027972
VERSION BC027972.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2666)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2666)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749458.
FEATURES Location/Qualifiers
source 1..2666
/db_xref="H-InvDB:HIT000040385"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34654 IMAGE:5240315"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2666
/gene="GPC2"
/gene_synonym="DKFZp547M109"
/db_xref="GeneID:221914"
/db_xref="HGNC:HGNC:4450"
CDS 169..1908
/gene="GPC2"
/gene_synonym="DKFZp547M109"
/codon_start=1
/product="glypican 2"
/protein_id="AAH27972.1"
/db_xref="GeneID:221914"
/db_xref="HGNC:HGNC:4450"
/translation="MSALRPLLLLLLPLCPGPGPGPGSEAKVTRSCAETRQVLGARGY
SLNLIPPALISGEHLRVCPQEYTCCSSETEQRLIRETEATFRGLVEDSGSFLVHTLAA
RHRKFDEFFLEMLSVAQHSLTQLFSHSYGRLYAQHALIFNGLFSRLRDFYGESGEGLD
DTLADFWAQLLERVFPLLHPQYSFPPDYLLCLSRLASSTDGSLQPFGDSPRRLRLQIT
RTLVAARAFVQGLETGRNVVSEALKVPVSEGCSQALMRLIGCPLCRGVPSLMPCQGFC
LNVVRGCLSSRGLEPDWGNYLDGLLILADKLQGPFSFELTAESIGVKISEGLMYLQEN
SAKVSAQVFQECGPPDPVPARNRRAPPPREEAGRLWSMVTEEERPTTAAGTNLHRLVW
ELRERLARMRGFWARLSLTVCGDSRMAADASLEAAPCWTGAGRGRYLPPVVGGSPAEQ
VNNPELKVDASGPDVPTRRRRLQLRAATARMKTAALGHDLDGQDADEDASGSGGGQQY
ADDWMAGAVAPPARPPRPPYPPRRDGSGGKGGGGSARYNQGRSRSGGASIGFHTQTIL
ILSLSALALLGPR"
BASE COUNT 574 a 723 c 828 g 541 t
ORIGIN
1 ggcagatgcc gcctggtcca gctatcgtgc tcggtattca gttttccgga gcagcgctct
61 ttctctggcc cgcggagcgg tcccgcggcc gagtaccgga ttcccgagtt tgggaggctc
121 tgctttcctc cttaggaccc actttgccgt cctggggtgg ctgcagttat gtccgcgctg
181 cgacctctcc tgcttctgct gctgcctctg tgtcccggtc ctggtcccgg acccgggagc
241 gaggcaaagg tcacccggag ttgtgcagag acccggcagg tgctgggggc ccggggatat
301 agcttaaacc taatccctcc cgccctgatc tcaggtgagc acctccgggt ctgtccccag
361 gagtacacct gctgttccag tgagacagag cagaggctga tcagggagac tgaggccacc
421 ttccgaggcc tggtggagga cagcggctcc tttctggttc acacactggc tgccaggcac
481 agaaaatttg atgagttttt tctggagatg ctctcagtag cccagcactc tctgacccag
541 ctcttctccc actcctacgg ccgcctgtat gcccagcacg ccctcatatt caatggcctg
601 ttctctcggc tgcgagactt ctatggggaa tctggtgagg ggttggatga caccctggcg
661 gatttctggg cacagctcct ggagagagtg ttcccgctgc tgcacccaca gtacagcttc
721 ccccctgact acctgctctg cctctcacgc ttggcctcat ctaccgatgg ctctctgcag
781 ccctttgggg actcaccccg ccgcctccgc ctgcagataa cccggaccct ggtggctgcc
841 cgagcctttg tgcagggcct ggagactgga agaaatgtgg tcagcgaagc gcttaaggtg
901 ccggtgtctg aaggctgcag ccaggctctg atgcgtctca tcggctgtcc cctgtgccgg
961 ggggtcccct cacttatgcc ctgccagggc ttctgcctca acgtggttcg tggctgtctc
1021 agcagcaggg gactggagcc tgactggggc aactatctgg atggtctcct gatcctggct
1081 gataagctcc agggcccctt ttcctttgag ctgacggccg agtccattgg ggtgaagatc
1141 tcggagggtt tgatgtacct gcaggaaaac agtgcgaagg tgtccgccca ggtgtttcag
1201 gagtgcggcc cccccgaccc ggtgcctgcc cgcaaccgtc gagccccgcc gccccgggaa
1261 gaggcgggcc ggctgtggtc gatggtgacc gaggaggagc ggcccacgac ggccgcaggc
1321 accaacctgc accggctggt gtgggagctc cgcgagcgtc tggcccggat gcggggcttc
1381 tgggcccggc tgtccctgac ggtgtgcgga gactctcgca tggcagcgga cgcctcgctg
1441 gaggcggcgc cctgctggac cggagccggg cggggccggt acttgccgcc agtggtcggg
1501 ggctccccgg ccgagcaggt caacaacccc gagctcaagg tggacgcctc gggccccgat
1561 gtcccgacac ggcggcgtcg gctacagctc cgggcggcca cggccagaat gaaaacggcc
1621 gcactgggac acgacctgga cgggcaggac gcggatgagg atgccagcgg ctctggaggg
1681 ggacagcagt atgcagatga ctggatggct ggggctgtgg ctcccccagc ccggcctcct
1741 cggcctccat accctcctag aagggatggt tctgggggca aaggaggagg tggcagtgcc
1801 cgctacaacc agggccggag caggagtggg ggggcatcta ttggttttca cacccaaacc
1861 atcctcattc tctccctctc agccctggcc ctgcttggac ctcgataacg ggggaggggt
1921 gccctagcat cagaagggtt catggccctt tcccctcctc ccccctcagc tgggcctggg
1981 gaggagtcga agggggctgc agagagggta gagaagggac tttgcaggtg aatggctggg
2041 gccccaaatc caggagattt tcatcagagg tgggtgggtg ttcacaatat ttattttttc
2101 atttggtaat gggagggggg cctgggggta tttatttagg agggagtgtg gtttccttag
2161 aaggtatagt ctccagccct ctaaggctgg ggctggtgat cagccccaac agagaaaatg
2221 aggagtttag agttgcagct ggggaagggg tttgaaggaa gttggaagtg gggaggggtg
2281 ggggcatctg gtctcagaaa tggaccagct ggatgcaggg caggggactg agggtgcttg
2341 agtaggatgt gagacttcat gggcctgggt tctgttgagt tttttcagta tcaatttctt
2401 aaaccaaatt ttaaaaaaaa caaggtgggg gggtgctcat ctcgtgacct ctgccaccca
2461 catccttcac aaactccatg tttcagtgtt tgagtccatg tttattctgc aaataaatgg
2521 taatgtattg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaaaaaaaaa aaaaaa
//