LOCUS BC027968 694 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-C motif) ligand 19, mRNA (cDNA clone
MGC:34433 IMAGE:5225849), complete cds.
ACCESSION BC027968
VERSION BC027968.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 694)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 694)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22165424.
FEATURES Location/Qualifiers
source 1..694
/db_xref="H-InvDB:HIT000040382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34433 IMAGE:5225849"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..694
/gene="CCL19"
/gene_synonym="CKb11"
/gene_synonym="ELC"
/gene_synonym="MGC34433"
/gene_synonym="MIP-3b"
/gene_synonym="MIP3B"
/db_xref="GeneID:6363"
/db_xref="HGNC:HGNC:10617"
/db_xref="MIM:602227"
CDS 125..421
/gene="CCL19"
/gene_synonym="CKb11"
/gene_synonym="ELC"
/gene_synonym="MGC34433"
/gene_synonym="MIP-3b"
/gene_synonym="MIP3B"
/codon_start=1
/product="chemokine (C-C motif) ligand 19"
/protein_id="AAH27968.1"
/db_xref="GeneID:6363"
/db_xref="HGNC:HGNC:10617"
/db_xref="MIM:602227"
/translation="MALLLALSLLVLWTSPAPTLSGTNDAEDCCLSVTQKPIPGYIVR
NFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQRTSAKMKRRSS"
BASE COUNT 175 a 216 c 171 g 132 t
ORIGIN
1 catcactcac accttgcatt tcacccctgc atcccagtcg ccctgcagcc tcacacagat
61 cctgcacaca cccagacagc tggcgctcac acattcaccg ttggcctgcc tctgttcacc
121 ctccatggcc ctgctactgg ccctcagcct gctggttctc tggacttccc cagccccaac
181 tctgagtggc accaatgatg ctgaagactg ctgcctgtct gtgacccaga aacccatccc
241 tgggtacatc gtgaggaact tccactacct tctcatcaag gatggctgca gggtgcctgc
301 tgtagtgttc accacactga ggggccgcca gctctgtgca cccccagacc agccctgggt
361 agaacgcatc atccagagac tgcagaggac ctcagccaag atgaagcgcc gcagcagtta
421 acctatgacc gtgcagaggg agcccggagt ccgagtcaag cattgtgaat tattacctaa
481 cctggggaac cgaggaccag aaggaaggac caggcttcca gctcctctgc accagacctg
541 accagccagg acagggcctg gggtgtgtgt gagtgtgagt gtgagcgaga gggtgagtgt
601 ggtcagagta aagctgctcc acccccagat tgcaatgcta ccaataaagc cgcctggtgt
661 ttacaactaa aaaaaaaaaa aaaaaaaaaa aaaa
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