LOCUS BC027947 2382 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens HCLS1 binding protein 3, mRNA (cDNA clone
IMAGE:5207261), with apparent retained intron.
ACCESSION BC027947
VERSION BC027947.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2382)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2382)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: h Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68800429
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2382
/db_xref="H-InvDB:HIT000040370"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5207261"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 506 a 620 c 695 g 561 t
ORIGIN
1 cgcccggagt ccccgccgcc gtcatgcagt ccccggcggt gctcgtcacc tccaggcgac
61 ttcagaatgc ccacactggc ctcgacctga ctgtgcccca gcaccaggag gtacggggca
121 agatgatgtc tggacacgtg gagtaccaga tcctggtggt gacccgtctg gctgcgttca
181 agtcggccaa gcacaggccc gaggatgtcg tccagttctt ggtctccaaa aagtacagcg
241 agattgagga gttttaccag aaactgagca gtcgttatgc agcagccagc ctccccccac
301 tacccaggaa ggtcctgttt gttggggagt ctgacatccg ggagaggaga gccgtgttca
361 atgagatcct gcgctgtgtc tccaaggatg ccgagttggc aggcagccca gagctgctag
421 agttcttagg taccagatcc ccaggggctg cagggctcac cagcagagat tcctctgtcc
481 tggatggcac agacagtcag acagggaatg atgaagaggc tttcgacttt tttgaggagc
541 aagaccaagt ggcagaagag ggtccgcccg tccagagcct gaagggcgag gatgctgagg
601 aatccttgga ggaggaggag gcgctggacc ctctgggcat tatgcggttg gtctcctgtt
661 gttgagaggg cccctttggt gtattccagg ctttctggag atgacgtccc ccttccctgg
721 aatctgagaa aagccctgag catcccaggt cgccccctcg cagggatctg ggccacgagg
781 ccttggcctg gtgtgttggg ggaagtagct ctctgcgtgc ccttggtggt gtgcatgtct
841 ctgggactgg gcttaggtgt cgcctccctt ctcgggtcac aggatgtcct ccacttgtgg
901 ctccgcactg gggcttggta gagtcctccg tgacagctca gtagtgcagg ctgcgggcct
961 gtccggctag tgtgggagga ctgggtgctc cttccagctg tgggactcgc agaggtggct
1021 gcggctctct gggctgcatc atctgcatag caggagcatt caccttggcc ctgcctccac
1081 acagggccat tcaccagcca tacatctctg gccatttaca atctcttttc ttcggttttc
1141 ctcagtgaaa atggactcat ggtcgtatca acctcttagg gctcctgtga cgatgaactg
1201 agttatgtaa atttagcaat cagctaccat catggcccca tctttcagtg gaatcagacc
1261 aggccagggg tgctgtcctc cccgctctct accacaacga atgtctctta gccgtttacc
1321 aaagccctcg ggcgccagat gagtgtaggt cctgccgcag aaaggaatta gagcccagta
1381 gaaattaggc agaagcaagt tcaacttcat cagcatgtag aattctctcc taaaatcaca
1441 gcccactctg gaaaggcctt cttcgtgggg agggttatgg gagggtgggc tgcagggtgg
1501 ccatgagacc agcgtccagg ggtgaggatt tgcattggga aagggtacgc ggcgctcagg
1561 gagctgcagc agaaacaggc ctgagatctg gggtcctgcg gcacctgggc acagcaagtg
1621 ccctgcagtc gctcctcctg gccctccgtg gctggccttg tccctgagtg gggtcagcgg
1681 ccctgaggga gaggcagcca gagtagtggg tgatgtgggg acaagcctgt aatagtcact
1741 ccttatcagc ctggcccaac gcggcaggcc tttcttgggc tttattttgg taagggtgag
1801 gctttgtttg aactcacatt ctctgttgtt ctgagtaacc acacgtagtg ccaaaccgag
1861 atggactttg gtggtctgtg ccaacctttg gctgaagaac acacttagca gagcggctcc
1921 ttttttgggt aggaaaatgt tctttgtggc tggcaagtgc tgccttgaac ttcctactta
1981 cttcattagc agattgtcag gggagatgtg tcagctatcc tgggacccct tggcggggcg
2041 gggggggggg ccagccccct ccccagctct gtactctggg gccctcaccc ctgaatcctg
2101 ggaaagctta gcacctaaga gtaatcctgc cggcttaaga ccctcccctg ctggggtttc
2161 tttttaagga ccggtgtgac aaggtgctga tgaatcaacg ttatcacctc tgtcaggaat
2221 aataagtaaa ttttttgaga gtttatgaaa tgctgggaac taagttagca tttgcttgca
2281 tgatctcatt atatctgtaa gacagcattt ctgaaactac ttgctacaac ccatagtaaa
2341 aactatatgg tacgccaaaa aaaaaaaaaa aaaaaaaaaa aa
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