LOCUS BC027854 1975 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vaccinia related kinase 2, mRNA (cDNA clone MGC:34431
IMAGE:5221315), complete cds.
ACCESSION BC027854
VERSION BC027854.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1975)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1975)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543935.
FEATURES Location/Qualifiers
source 1..1975
/db_xref="H-InvDB:HIT000040315"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34431 IMAGE:5221315"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1975
/gene="VRK2"
/db_xref="GeneID:7444"
/db_xref="HGNC:HGNC:12719"
/db_xref="MIM:602169"
CDS 184..1710
/gene="VRK2"
/codon_start=1
/product="vaccinia related kinase 2"
/protein_id="AAH27854.1"
/db_xref="GeneID:7444"
/db_xref="HGNC:HGNC:12719"
/db_xref="MIM:602169"
/translation="MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIY
LAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL
FYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN
EYVHGDVKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTS
LDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVL
KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINV
HTPNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEA
AQESTRRRQKYQESQEPLNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSW
YKYTSTVSTGITDLESSTGLWPTISQFTLSEETNADVYYYRIIIPVLLMLVFLALFFL
"
BASE COUNT 699 a 367 c 425 g 484 t
ORIGIN
1 gggccgctgc actgcgaggc cgacgcagct ggagagaagt taggcaggtc ctagggaggg
61 caggctcgag tgctgggccc gcctccccgc gggactgtag gcccgggggc tccgcctcgt
121 cgcagcggca ggtaggaggc ggtgcgcgcg gcccggcgac gggggatcct gaggcccgaa
181 gtgatgccac caaaaagaaa tgaaaaatac aaacttccta ttccatttcc agaaggcaag
241 gttctggatg atatggaagg caatcagtgg gtactgggca agaagattgg ctctggagga
301 tttggattga tatatttagc tttccccaca aataaaccag agaaagatgc aagacatgta
361 gtaaaagtgg aatatcaaga aaatggcccg ttattttcag aacttaaatt ttatcagaga
421 gttgcaaaaa aagactgtat caaaaagtgg atagaacgca aacaacttga ttatttagga
481 attcctctgt tttatggatc tggtctgact gaattcaagg gaagaagtta cagatttatg
541 gtaatggaaa gactaggaat agatttacag aagatctcag gccagaatgg tacctttaaa
601 aagtcaactg tcctgcaatt aggtatccga atgttggatg tactggaata tatacatgaa
661 aatgaatatg ttcatggtga tgtaaaagca gcaaatctac ttttgggtta caaaaatcca
721 gaccaggttt atcttgcaga ttatggactt tcctacagat attgtcccaa tgggaaccac
781 aaacagtatc aggaaaatcc tagaaaaggc cataatggga caatagagtt taccagcttg
841 gatgcccaca agggagtagc cttgtccaga cgaagtgacg ttgagatcct cggctactgc
901 atgctgcggt ggttgtgtgg gaaacttccc tgggaacaga acctgaagga ccctgtggct
961 gtgcagactg ctaaaacaaa tctgttggac gagctccccc agtcagtgct taaatgggct
1021 ccttctggaa gcagttgctg tgaaatagcc caatttttgg tatgtgctca tagtttagca
1081 tatgatgaaa agccaaacta tcaagccctc aagaaaattt tgaaccctca tggaatacct
1141 ttaggaccac tggacttttc cacaaaagga cagagtataa atgtccatac tccaaacagt
1201 caaaaagttg attcacaaaa ggctgcaaca aagcaagtca acaaggcaca caataggtta
1261 atcgaaaaaa aagtccacag tgagagaagc gctgagtcct gtgcaacatg gaaagtgcag
1321 aaagaggaga aactgattgg attgatgaac aatgaagcag ctcaggaaag cacaaggaga
1381 agacagaaat atcaagagtc tcaagaacct ttgaatgaag taaacagttt cccacaaaaa
1441 atcagctata cacaattccc aaactcattt tatgagcctc atcaagattt taccagtcca
1501 gatatattca agaagtcaag atctccatct tggtataaat acacttccac agtcagcacg
1561 gggatcacag acttagaaag ttcaactgga ctttggccta caatttccca gtttactctt
1621 agtgaagaga caaacgcaga tgtttattat tatcgcatca tcatacctgt ccttttgatg
1681 ttagtatttc ttgctttatt ttttctctga agatgatacc aaaattcctt ttgataattt
1741 tttaagtttc cagctcttca ccgaaatgtt gtattcttat ttcagtgttt ccttccagac
1801 atttttaagg taattggctt taaaaagaga acatatttta acaaagtttg tggacactct
1861 aaaaaataaa attgctttgt actagaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//