LOCUS BC027733 884 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens interleukin 1 receptor, type II, mRNA (cDNA clone
IMAGE:4546395), partial cds.
ACCESSION BC027733
VERSION BC027733.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 884)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 884)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC027733.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: d Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894333.
FEATURES Location/Qualifiers
source 1..884
/db_xref="H-InvDB:HIT000091379"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4546395"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>884
/gene="IL1R2"
/gene_synonym="IL1RB"
/gene_synonym="MGC47725"
/db_xref="GeneID:7850"
/db_xref="MIM:147811"
CDS 184..>884
/gene="IL1R2"
/gene_synonym="IL1RB"
/gene_synonym="MGC47725"
/codon_start=1
/product="IL1R2 protein"
/protein_id="AAH27733.1"
/db_xref="GeneID:7850"
/db_xref="MIM:147811"
/translation="MLRLYVLVMGVSAFTLQPAAHTGAARSCRFRGRHYKREFRLEGE
PVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQED
SGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTR
DKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQY
NITRSIELRIKKKKK"
misc_feature 307..561
/gene="IL1R2"
/gene_synonym="IL1RB"
/gene_synonym="MGC47725"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
misc_feature 622..870
/gene="IL1R2"
/gene_synonym="IL1RB"
/gene_synonym="MGC47725"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
BASE COUNT 225 a 214 c 225 g 220 t
ORIGIN
1 gtgggatggg agatactgtt gtggtcacct ctggaaaata cattctgcta ctcttaaaaa
61 ctagtgacgc tcatacaaat caacagaaag agcttctgaa ggaagacttt aaagctgctt
121 ctgccacgtg ctgctgggtc tcagtcctcc acttcccgtg tcctctggaa gttgtcagga
181 gcaatgttgc gcttgtacgt gttggtaatg ggagtttctg ccttcaccct tcagcctgcg
241 gcacacacag gggctgccag aagctgccgg tttcgtggga ggcattacaa gcgggagttc
301 aggctggaag gggagcctgt agccctgagg tgcccccagg tgccctactg gttgtgggcc
361 tctgtcagcc cccgcatcaa cctgacatgg cataaaaatg actctgctag gacggtccca
421 ggagaagaag agacacggat gtgggcccag gacggtgctc tgtggcttct gccagccttg
481 caggaggact ctggcaccta cgtctgcact actagaaatg cttcttactg tgacaaaatg
541 tccattgagc tcagagtttt tgagaataca gatgctttcc tgccgttcat ctcatacccg
601 caaattttaa ccttgtcaac ctctggggta ttagtatgcc ctgacctgag tgaattcacc
661 cgtgacaaaa ctgacgtgaa gattcaatgg tacaaggatt ctcttctttt ggataaagac
721 aatgagaaat ttctaagtgt gagggggacc actcacttac tcgtacacga tgtggccctg
781 gaagatgctg gctattaccg ctgtgtcctg acatttgccc atgaaggcca gcaatacaac
841 atcactagga gtattgagct acgcatcaaa aaaaaaaaaa aaaa
//