LOCUS BC026347 3717 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cyclin-dependent kinase 5, regulatory subunit 1 (p35),
mRNA (cDNA clone MGC:26687 IMAGE:4816946), complete cds.
ACCESSION BC026347
VERSION BC026347.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3717)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3717)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304373.
FEATURES Location/Qualifiers
source 1..3717
/db_xref="H-InvDB:HIT000040211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26687 IMAGE:4816946"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3717
/gene="CDK5R1"
/gene_synonym="CDK5P35"
/gene_synonym="CDK5R"
/gene_synonym="MGC33831"
/gene_synonym="NCK5A"
/gene_synonym="p23"
/gene_synonym="p25"
/gene_synonym="p35"
/gene_synonym="p35nck5a"
/db_xref="GeneID:8851"
/db_xref="HGNC:HGNC:1775"
/db_xref="MIM:603460"
CDS 71..994
/gene="CDK5R1"
/gene_synonym="CDK5P35"
/gene_synonym="CDK5R"
/gene_synonym="MGC33831"
/gene_synonym="NCK5A"
/gene_synonym="p23"
/gene_synonym="p25"
/gene_synonym="p35"
/gene_synonym="p35nck5a"
/codon_start=1
/product="cyclin-dependent kinase 5, regulatory subunit 1
(p35)"
/protein_id="AAH26347.1"
/db_xref="GeneID:8851"
/db_xref="HGNC:HGNC:1775"
/db_xref="MIM:603460"
/translation="MGTVLSLSPSYRKATLFEDGAATVGHYTAVQNSKNAKDKNLKRH
SIISVLPWKRIVAVSAKKKNSKKVQPNSSYQNNITHLNNENLKKSLSCANLSTFAQPP
PAQPPAPPASQLSGSQTGGSSSVKKAPHPAVTSAGTPKRVIVQASTSELLRCLGEFLC
RRCYRLKHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSKVGS
DHELQAVLLTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQIN
ADPHYFTQVFSDLKNESGQEDKKRLLLGLDR"
BASE COUNT 843 a 971 c 962 g 941 t
ORIGIN
1 ggttttatcc ctccggccgg caggctgggc gcgcaggggc gcgagccccc gcccggcgcg
61 cagcagcacc atgggcacgg tgctgtccct gtctcccagc taccggaagg ccacgctgtt
121 tgaggatggc gcggccaccg tgggccacta tacggccgta cagaacagca agaacgccaa
181 ggacaagaac ctgaagcgcc actccatcat ctccgtgctg ccttggaaga gaatcgtggc
241 cgtgtcggcc aagaagaaga actccaagaa ggtgcagccc aacagcagct accagaacaa
301 catcacgcac ctcaacaatg agaacctgaa gaagtcgctg tcatgcgcca acctgtccac
361 attcgcccag cccccaccgg cccagccgcc tgcacccccg gccagccagc tctcgggttc
421 ccagaccggg ggctcctcct cagtcaagaa agcccctcac cctgccgtca cctccgcagg
481 gacgcccaaa cgggtcatcg tccaggcgtc caccagtgag ctgcttcgct gcctgggtga
541 gtttctctgc cgccggtgct accgcctgaa gcacctgtcc cccacggacc ccgtgctctg
601 gctgcgcagc gtggaccgct cgctgcttct gcagggctgg caggaccagg gcttcatcac
661 gccggccaac gtggtcttcc tctacatgct ctgcagggat gttatctcct ccaaggtggg
721 ctcggatcac gagctccagg ccgtcctgct gacatgcctg tacctctcct actcctacat
781 gggcaacgag atctcctacc cgctcaagcc cttcctggtg gagagctgca aggaggcctt
841 ttgggaccgt tgcctctctg tcatcaacct catgagctca aagatgctgc agataaatgc
901 cgacccacac tacttcacac aggtcttctc cgacctgaag aacgagagcg gccaggagga
961 caagaagcgg ctcctcctag gcctggatcg gtgagcactg tagcctgcgt catggctcaa
1021 ggattcaatg catttttaag aatttattat taaatcagtt ttgtgtacag tatgtgtcta
1081 gcaaagccac caagggcctc acctttccca cagtctctcc ctggggtttt tttcatccct
1141 gccaagaact ctgggcactt ttgaactcac gagccttgcg caaaacccag aagatgtatt
1201 cagagccacc caggccactg acctcccact ttggggaact caaaggactg acctgcccct
1261 gccgcctgtg cccttgctgg gtccagggta ggcaaggctg ccggctgcac cctgtatgga
1321 gctagagagg ggcctctggc tgcctggccc agggaggaat tggggtttct ggttggaggc
1381 ccttttctgg ctcctgtgtg gagttattca ctctcccaga ggctcctgga gccagccacc
1441 ctaactgagc tgccagtggg gtcgtgaggc aagatccccg ccacccgggg acatcttcaa
1501 tctaggcgag gcgaagctga gcgggtctag tggaaagatt gtgtctggtc gtttgaccac
1561 acaccgccct gatttgctgt tttctttttt tagggagaag ggcttttctt tagtggagaa
1621 atggaactcg cccccctacc cccttgtctg ctgctcccag ccacgttggt ggtattggcc
1681 gatgagctgg tttgactcat taatttctct caatttgggt cccagctaaa gaggtggggt
1741 gaagctgggg acagctttcc tgggtgagtt tttcttttga ataatgtagt gcagtcaccc
1801 tgtggcaaat gccaggacag ctgcaggtgc ccattagcaa cgcctgcctt ctgggcaagg
1861 tgagggatgc cataccttga gaccaagccg gtgcccacct aagggctaag gcctcttgct
1921 ggtgcacatg acatttgtcc tgcagagctg gggggaaggc gatgtggtga ccccaccccc
1981 acccgttaat ttaaagctgt ttctaaacag ttgagtttct tctaaagagg aagccttgcc
2041 cagcaaggac cagtgagaca gccggatctt ggagacaatt acaagacggg gagtgagact
2101 cctgattgct ctggaagcct gctgatttct acaactgatc atttgcagct gctggttttg
2161 gtctccacct taccctactg gctgtaaaaa cacaaatgtg tactttattg attttctttc
2221 taattctccc gcattggtgg cttgggactt gggagaggga gcaagccttc ctccatggcc
2281 catcactcgg ctgtggagaa caaagaccaa tgtgaagaca ctacagagga ttctgtcttc
2341 caggcccagt ccactgggga gtgctggaat ggggacctgg ggtggggagg cagagggtca
2401 ctttacatag gattaagttc gaggtggcta ccgatttcag cacatgcact actgaaattt
2461 acacaaaaag aaagctgtga aattgaagtc ccaatttaag agtcgtgagg cagaacctgg
2521 tggctggagg cattcccaga ggtggggaag agagcctgcc cggccggaga acatctgcct
2581 tgctgcacct gaggcccagc agagccgttc ctgggactgt cagataatcg gtgcagcggt
2641 ggaaggagcc tgcggctgct ggcacagact tcacacagca cctcctctct gctgggtttc
2701 cacacagcct gtcttcagat cctgctgccg cgtgcgacca gaggtgggag gcccctggtg
2761 gcatggaaga gggaggatca gtgccaagtc tcaggaggag ggcgcatgtg tgtatcaccc
2821 tcagctggcg gaacctggct gcgaactgtg cagttacgtt gcatccacag gattccagtt
2881 gcgtgtctgt ttccttctct ttctccgtat ttattttttt attcttcgga ggaggtggac
2941 atttcggaag tggtggggac taagggaaga actctctagt tccctcagtg tgaagcatgt
3001 cgtgttctct ccccttgcac tggtcatcag tattgtgtaa aggaacaact gatatacttg
3061 agtgtgcaag caaagaaccc atttgccatg ctgctatgaa gactactttt agatcaacaa
3121 taaaaaaaaa cctacaaaaa aacctttatt ctttaattgt tgcttttacg gtgatattgt
3181 gcatgcaaac caggagcatt ttgtgtctta agaaaaataa tcttagaaca gatggctgtg
3241 aaaattacac ccatgcacag aacaagccac aggaataata gttcaggatt tggtttttct
3301 ctttttcttg taaacctgga gggttgatat attctttcca tgcagttatt agaacttagt
3361 tttgttccaa cagttaaact tgcaatgaaa agaaaatgtg ccattttttt cactcagaat
3421 tattcatagc tgtatatttg aaactgctaa ttacacacgt gtgatgtatg ttggtttttt
3481 agtgcaattt cttctgtagc tattctttga ccaaactgtg ggtattgtta atattaattt
3541 atatttgtct cattttgtat gtatgtgtag tgtgtttgtg agtatgtgtg gtttataatc
3601 tgacaaagtc atgaagctca gtttggctgt aatttaattc cccttccctt atttttattt
3661 atttttgtac tgtgctgatt caataaaatg cactgaccat ccaaaaaaaa aaaaaaa
//