LOCUS BC026314 2400 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens SHC (Src homology 2 domain containing) transforming
protein 3, mRNA (cDNA clone MGC:26094 IMAGE:4819086), complete cds.
ACCESSION BC026314
VERSION BC026314.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: o Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314678.
FEATURES Location/Qualifiers
source 1..2400
/db_xref="H-InvDB:HIT000040191"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26094 IMAGE:4819086"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2400
/gene="SHC3"
/gene_synonym="N-Shc"
/gene_synonym="NSHC"
/gene_synonym="SHCC"
/db_xref="GeneID:53358"
/db_xref="HGNC:HGNC:18181"
/db_xref="MIM:605263"
CDS 309..2093
/gene="SHC3"
/gene_synonym="N-Shc"
/gene_synonym="NSHC"
/gene_synonym="SHCC"
/codon_start=1
/product="SHC (Src homology 2 domain containing)
transforming protein 3"
/protein_id="AAH26314.1"
/db_xref="GeneID:53358"
/db_xref="HGNC:HGNC:18181"
/db_xref="MIM:605263"
/translation="MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAA
PYLVSGEALRKAPVDGPGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSA
PSLAAPDGSAPSAPRAPAMSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYL
GCIEVLRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNL
QFAGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVN
RRACHILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLDEPWTEEEG
DGSDHPYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQFAGKEQTYYQGRHLGDTFGED
WQQTPLRQGSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQAWPAAVSSAESSPRKDL
FDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRKE
AEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVFDSISHL
INHHLESSLPIVSAGSELCLQQPVERKQ"
BASE COUNT 550 a 721 c 688 g 441 t
ORIGIN
1 gtgcttttgc tgtgagcagc cccaagcagc tgggcgctcc atcagaggca actatgactt
61 ttgcaaagca aacgtgcaac cccaagcagc ggtctcccgg gccggggctg cgcggccgcc
121 gctgtgctgg cttttaacgg tgggagggca ccatcctctt gctctgctct cgttctccag
181 aaggctgtcc cggggccccc actctccgtc ccgctccggg gacagtggct cgcctgctat
241 gcgcggcagc ccgcgccggg gccggcacca gcagcgcccg ggcggatgca gcgagcccac
301 ggaggggcat gcttccacgc accaagtata accgcttcag gaatgactcg gtgacatcgg
361 tcgatgacct tctccacagc ctgtcggtga gcggcggcgg aggcaaggtt tcggcggcgc
421 gcgcgacccc ggcggcggct ccctacttgg tgtccggcga ggcgctgcgc aaggcgcccg
481 tcgatgggcc cggcagcctg ggccacctgc tccacaaggt gtcccacctg aaactctcca
541 gctcgggcct ccgcggcctg tcgtcggccg cccgggagcg ggcgggcgcg cggctctcgg
601 gcagctgcag cgcgcccagc ctggccgccc cggacggcag tgcgccctcg gcgccccgcg
661 ccccggccat gagcgccgcc aggaagggcc ggcccggcga cgagccgctg cccaggcccc
721 ctcggggggc gccgcacgcc agcgaccagg tgctggggcc cggagtcacc tacgtggtca
781 agtacttggg gtgcattgaa gttctgcgct caatgaggtc tcttgacttc agtacaagaa
841 cacaaattac cagggaagcc atcagccgcg tctgtgaagc tgtgcctggt gcgaagggag
901 ccttcaagaa gagaaagcct ccaagcaaaa tgctgtccag catcttggga aagagcaacc
961 tccagtttgc gggaatgagc atctctctga ccatctccac ggccagtctg aacctgcgaa
1021 ctccggactc caaacagatc atagcgaatc accacatgcg gtccatctcc ttcgcctctg
1081 ggggagaccc ggacacgact gactatgttg catatgtgac taaggaccct gttaatcgca
1141 gagcttgtca cattttggaa tgctgtgatg ggctggccca ggatgtcatc ggctccatcg
1201 gacaagcctt tgagctccgg tttaagcaat atttacagtg tcctaccaag attcccgctc
1261 tccatgatcg aatgcagagt ctggatgagc catggacgga agaggaggga gatggctcag
1321 accacccata ctacaacagc atcccaagca agatgcctcc tccagggggc tttcttgata
1381 ctagactgaa acccagaccc catgctcctg acacagccca gtttgcagga aaagagcaga
1441 cttattacca gggaagacac ttaggagaca cttttggcga agactggcag caaacacctt
1501 taaggcaagg gtcctcggac atctacagca cgccagaagg gaaactgcac gtggccccca
1561 cgggagaagc acccacctac gtcaacactc agcagatccc accacaggcc tggccggctg
1621 cggtcagcag tgctgagagc agcccaagga aagacctctt tgacatgaaa ccttttgaag
1681 atgctctcaa gaaccagccc ttggggcccg tgttaagcaa ggcagcctcc gtggagtgca
1741 tcagccctgt gtcacctaga gccccagatg ccaagatgct ggaggaactg caagccgaga
1801 cttggtacca aggagagatg agcaggaagg aggcagaggg gctgctggag aaagacggag
1861 acttcctggt caggaagagc accaccaacc cgggctcctt tgtcctcacg ggcatgcaca
1921 atggccaggc caagcacctg ctgctcgtgg acccagaagg cacgatccag acaaaggaca
1981 gagtctttga cagtatcagc cacctcatca accaccacct agaaagcagc ctgcccattg
2041 tctctgcagg gagtgagctg tgtctccagc agccagtgga gaggaagcag tgacatggcc
2101 agcactgctc ccggcactgc gcaccaggtc aggaggacct ggagtggact agaatcgggg
2161 ctgctggaac tgggacagct gcctgtggct cagagccttc ttcaaaagct tcaaaaggaa
2221 ggcttccttt aaggtcaagt ttcataaact tggttctgaa tttctcatat gcatattaaa
2281 ggtgtacata cctatacatc ctgtacaaat tatccctcta tatttatatt ttttaagact
2341 aagaaagacg taagactaat gttctgtgct gtatgttttt aatgaaaaaa aaaaaaaaaa
//