LOCUS BC026290 3178 bp mRNA linear HUM 02-MAR-2004
DEFINITION Homo sapiens acyl-CoA synthetase long-chain family member 1, mRNA
(cDNA clone IMAGE:4607371), partial cds.
ACCESSION BC026290
VERSION BC026290.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3178)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3178)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: f Column: 15.
FEATURES Location/Qualifiers
source 1..3178
/db_xref="H-InvDB:HIT000091250"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4607371"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..3178
/gene="ACSL1"
/gene_synonym="ACS1"
/gene_synonym="FACL1"
/gene_synonym="FACL2"
/gene_synonym="LACS"
/gene_synonym="LACS1"
/gene_synonym="LACS2"
/db_xref="GeneID:2180"
/db_xref="MIM:152425"
CDS <1..1622
/gene="ACSL1"
/gene_synonym="ACS1"
/gene_synonym="FACL1"
/gene_synonym="FACL2"
/gene_synonym="LACS"
/gene_synonym="LACS1"
/gene_synonym="LACS2"
/codon_start=3
/product="ACSL1 protein"
/protein_id="AAH26290.1"
/db_xref="GeneID:2180"
/db_xref="MIM:152425"
/translation="WVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKP
EKAKLLLEGVENKLIPGLKIIVVMDAYGSELVERGQRCGVEVTSMKAMEDLGRANRRK
PKPPAPEDLAVICFTSGTTGNPKGAMVTHRNIVSDCSAFVKATENTVNPCPDDTLISF
LPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRLLNRMFDRI
FGQANTTLKRWLLDFASKRKEAELRSGIIRNNSLWDRLIFHKVQSSLGGRVRLMVTGA
APVSATVLTFLRAALGCQFYEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVD
VEEMNYMAAEGEGEVCVKGPNVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLK
IIDRKKHIFKLAQGEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLC
SWAQKRGFEGSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVKGITLHPELFSIDN
GLLTPTMKAKRPELRNYFRSQIDDLYSTIKV"
misc_feature 3..1289
/gene="ACSL1"
/gene_synonym="ACS1"
/gene_synonym="FACL1"
/gene_synonym="FACL2"
/gene_synonym="LACS"
/gene_synonym="LACS1"
/gene_synonym="LACS2"
/note="AMP-binding; Region: AMP-binding enzyme"
/db_xref="CDD:pfam00501"
BASE COUNT 932 a 642 c 738 g 866 t
ORIGIN
1 agtgggtgat tattgaacaa ggatgctttg cttattcgat ggtgatcgtt ccactttatg
61 atacccttgg aaatgaagcc atcacgtaca tagtcaacaa agctgaactc tctctggttt
121 ttgttgacaa gccagagaag gccaaactct tattagaggg tgtagaaaat aagttaatac
181 caggccttaa aatcatagtt gtcatggatg cctacggcag tgaactggtg gaacgaggcc
241 agaggtgtgg ggtggaagtc accagcatga aggcgatgga ggacctggga agagccaaca
301 gacggaagcc caagcctcca gcacctgaag atcttgcagt aatttgtttc acaagtggaa
361 ctacaggcaa ccccaaagga gcaatggtca ctcaccgaaa catagtgagc gattgttcag
421 cttttgtgaa agcaacagag aatacagtca atccttgccc agatgatact ttgatatctt
481 tcttgcctct cgcccatatg tttgagagag ttgtagagtg tgtaatgctg tgtcatggag
541 ctaaaatcgg atttttccaa ggagatatca ggctgctcat ggatgacctc aaggtgcttc
601 aacccactgt cttccccgtg gttccaagac tgctgaaccg gatgtttgac cgaattttcg
661 gacaagcaaa caccacgctg aagcgatggc tcttggactt cgcctccaag aggaaagaag
721 cagagcttcg cagcggcatc atcagaaaca acagcctgtg ggaccggctg atcttccaca
781 aagtacagtc gagcctgggc ggaagagtcc ggctgatggt gacaggagcc gccccggtgt
841 ctgccactgt gctgacgttc ctcagagcag ccctgggctg tcagttttat gaaggatacg
901 gacagacaga gtgcactgcc gggtgctgcc taaccatgcc tggagactgg accgcaggcc
961 atgttggggc cccgatgccg tgcaatttga taaaacttgt tgatgtggaa gaaatgaatt
1021 acatggctgc cgagggcgag ggcgaggtgt gtgtgaaagg gccaaatgta tttcagggct
1081 acttgaagga cccagcgaaa acagcagaag ctttggacaa agacggctgg ttacacacag
1141 gggacattgg aaaatggtta ccaaatggca ccttgaaaat tatcgaccgg aaaaagcaca
1201 tatttaagct ggcacaagga gaatacatag cccctgaaaa gattgaaaat atctacatgc
1261 gaagtgagcc tgttgctcag gtgtttgtcc acggagaaag cctgcaggca tttctcattg
1321 caattgtggt accagatgtt gagacattat gttcctgggc ccaaaagaga ggatttgaag
1381 ggtcgtttga ggaactgtgc agaaataagg atgtcaaaaa agctatcctc gaagatatgg
1441 tgagacttgg gaaggattct ggtctgaaac catttgaaca ggtcaaaggc atcacattgc
1501 accctgaatt attttctatc gacaatggcc ttctgactcc aacaatgaag gcgaaaaggc
1561 cagagctgcg gaactatttc aggtcgcaga tagatgacct ctattccact atcaaggttt
1621 agtgtgaaga agaaagctca gaggaaatgg cacagttcca caatctcttc tcctgctgat
1681 ggccttcatg ttgttaattt tgaatacagc aagtgtaggg aaggaagcgt tcgtgtttga
1741 cttgtccatt cggggttctt ctcataggaa tgctagagga aacagaacac tgccttacag
1801 tcacctcatg ttgcagacca tgtttatggt aatacacact ttccaaaatg agccttaaaa
1861 attgtaaagg ggatactata aatgtgctaa gttatttgag acttcctcag tttaaaaagt
1921 gggttttaaa tcttctgtct ccctgttttt ctaatcaagg ggttaggact ttgctatctc
1981 tgagatgtct gctacttgct gcaaattctg cagctgtctg ctgctctaaa gagtacagtg
2041 cactagaggg aagtgttccc tttaaaaata agaacaactg tcctggctgg agaatctcac
2101 aagcggacca gagatctttt taaatccctg ctactgtccc ttctcacagg cattcacaga
2161 acccttctga ttcgtaaggg ttacgaaact catgttcttc tccagtcccc tgtggtttct
2221 gttggagcat aaggtttcca gtaagcggga gggcagatcc aactcagaac catgcagata
2281 aggagcctct ggcaaatggg tgctcatcag aacgcgtgga ttctctttca tggcagaatg
2341 ctcttggact cggttctcca ggcctgattc cccgactcca tcctttttca ggggttattt
2401 aaaaatctgc cttagattct atagtgaaga caagcatttc aagaaagagt tacctggatc
2461 agccatgctc agctgtgacg cctgaataac tgtctacttt atcttcactg aaccactcac
2521 tctgtgtaaa ggccaacaga tttttaatgt ggttttcata tcaaaagatc atgttgggat
2581 taacttgcct ttttccccaa aaaaataaac tctcaggcaa gcatttcttt aaagctatta
2641 agggagtata tacttgagta cttattgaaa tggacagtaa taagcaaatg ttcttataat
2701 gctacctgat ttctatgaaa tgtgtttgac aagccaaaat tctaggatgt agaaatctgg
2761 aaagttcatt tcctgggatt cacttctcca gggatttttt aaagttaatt tgggaaatta
2821 acagcagttc actttattgt gagtctttgc cacatttgac tgaattgagc tgtcatttgt
2881 acatttaaag cagctgtttt ggggtctgtg agagtacatg tattatatac aagcacaaca
2941 gggcttgcac taaagaattg tcattgtaat aacactactt ggtagcctaa cttcatatat
3001 gtattcttaa ttgcacaaaa agtcaataat ttgtcacctt ggggttttga atgtttgctt
3061 taagtgttgg ctatttctat gttttataaa ccaaaacaaa atttccaaaa acaatgaagg
3121 aaaccaaaat aaatatttct gcatttcgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//